Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDLRAD3Q86YD5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LDLRAD3Q86YD5 AC142381.3-201ENST00000568208 1670 ntBASIC20.1■□□□□ 0.81
LDLRAD3Q86YD5 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 U85056.1-201ENST00000616429 682 ntBASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
LDLRAD3Q86YD5 AL359258.2-201ENST00000564063 1566 ntBASIC20.08■□□□□ 0.81
LDLRAD3Q86YD5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LDLRAD3Q86YD5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LDLRAD3Q86YD5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LDLRAD3Q86YD5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LDLRAD3Q86YD5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.08■□□□□ 0.81
LDLRAD3Q86YD5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.07■□□□□ 0.8
LDLRAD3Q86YD5 AC079834.2-201ENST00000609776 1949 ntBASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LDLRAD3Q86YD5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 AC007029.1-201ENST00000604183 313 ntBASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAD3Q86YD5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAD3Q86YD5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LDLRAD3Q86YD5 AC096887.2-201ENST00000623443 1957 ntBASIC20.03■□□□□ 0.8
LDLRAD3Q86YD5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAD3Q86YD5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAD3Q86YD5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAD3Q86YD5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAD3Q86YD5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAD3Q86YD5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAD3Q86YD5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LDLRAD3Q86YD5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 SMPD5-203ENST00000639008 1464 ntBASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
LDLRAD3Q86YD5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20■□□□□ 0.79
LDLRAD3Q86YD5 AC022211.4-201ENST00000625094 2161 ntBASIC20■□□□□ 0.79
LDLRAD3Q86YD5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 AC025884.2-201ENST00000553429 711 ntBASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDLRAD3Q86YD5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 KRT18P60-201ENST00000312876 1297 ntBASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDLRAD3Q86YD5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms