Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.36■■□□□ 1.49
CCDC25Q86WR0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CCDC25Q86WR0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC25Q86WR0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC25Q86WR0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.34■■□□□ 1.49
CCDC25Q86WR0 AC133561.1-201ENST00000568600 2415 ntBASIC24.34■■□□□ 1.49
CCDC25Q86WR0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC25Q86WR0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC25Q86WR0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC25Q86WR0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC25Q86WR0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC25Q86WR0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC25Q86WR0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CCDC25Q86WR0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC25Q86WR0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CCDC25Q86WR0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.3■■□□□ 1.48
CCDC25Q86WR0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.29■■□□□ 1.48
CCDC25Q86WR0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC25Q86WR0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.29■■□□□ 1.48
CCDC25Q86WR0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC25Q86WR0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC25Q86WR0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC25Q86WR0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CCDC25Q86WR0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.26■■□□□ 1.47
CCDC25Q86WR0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC25Q86WR0 LINC00543-201ENST00000567234 1845 ntBASIC24.26■■□□□ 1.47
CCDC25Q86WR0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC25Q86WR0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC25Q86WR0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.26■■□□□ 1.47
CCDC25Q86WR0 AC126177.7-201ENST00000547904 679 ntBASIC24.26■■□□□ 1.47
CCDC25Q86WR0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.25■■□□□ 1.47
CCDC25Q86WR0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC25Q86WR0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.25■■□□□ 1.47
CCDC25Q86WR0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC25Q86WR0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CCDC25Q86WR0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC25Q86WR0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC25Q86WR0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC25Q86WR0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC25Q86WR0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.24■■□□□ 1.47
CCDC25Q86WR0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.24■■□□□ 1.47
CCDC25Q86WR0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CCDC25Q86WR0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
CCDC25Q86WR0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms