Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
VPS36Q86VN1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
VPS36Q86VN1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.46■■□□□ 1.67
VPS36Q86VN1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS36Q86VN1 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.45■■□□□ 1.66
VPS36Q86VN1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VPS36Q86VN1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.44■■□□□ 1.66
VPS36Q86VN1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VPS36Q86VN1 ECEL1P2-201ENST00000461596 1295 ntBASIC25.44■■□□□ 1.66
VPS36Q86VN1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.44■■□□□ 1.66
VPS36Q86VN1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
VPS36Q86VN1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
VPS36Q86VN1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
VPS36Q86VN1 HSD17B1P1-201ENST00000590052 955 ntBASIC25.43■■□□□ 1.66
VPS36Q86VN1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
VPS36Q86VN1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.43■■□□□ 1.66
VPS36Q86VN1 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.43■■□□□ 1.66
VPS36Q86VN1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.43■■□□□ 1.66
VPS36Q86VN1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.42■■□□□ 1.66
VPS36Q86VN1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS36Q86VN1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.42■■□□□ 1.66
VPS36Q86VN1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS36Q86VN1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS36Q86VN1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS36Q86VN1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS36Q86VN1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS36Q86VN1 AC022413.1-201ENST00000624602 984 ntBASIC25.41■■□□□ 1.66
VPS36Q86VN1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS36Q86VN1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS36Q86VN1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS36Q86VN1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS36Q86VN1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS36Q86VN1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS36Q86VN1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS36Q86VN1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS36Q86VN1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
VPS36Q86VN1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS36Q86VN1 RP9P-202ENST00000450133 1212 ntBASIC25.39■■□□□ 1.66
VPS36Q86VN1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.39■■□□□ 1.66
VPS36Q86VN1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS36Q86VN1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS36Q86VN1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS36Q86VN1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS36Q86VN1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.39■■□□□ 1.65
VPS36Q86VN1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
VPS36Q86VN1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS36Q86VN1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.38■■□□□ 1.65
VPS36Q86VN1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.38■■□□□ 1.65
VPS36Q86VN1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS36Q86VN1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS36Q86VN1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
VPS36Q86VN1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS36Q86VN1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
VPS36Q86VN1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS36Q86VN1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS36Q86VN1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
VPS36Q86VN1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS36Q86VN1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
VPS36Q86VN1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.36■■□□□ 1.65
VPS36Q86VN1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
VPS36Q86VN1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS36Q86VN1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS36Q86VN1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS36Q86VN1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.35■■□□□ 1.65
VPS36Q86VN1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS36Q86VN1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.35■■□□□ 1.65
VPS36Q86VN1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS36Q86VN1 LINC01124-201ENST00000409786 2117 ntBASIC25.34■■□□□ 1.65
VPS36Q86VN1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
VPS36Q86VN1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.34■■□□□ 1.65
VPS36Q86VN1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
VPS36Q86VN1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS36Q86VN1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS36Q86VN1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
VPS36Q86VN1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.34■■□□□ 1.65
VPS36Q86VN1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.34■■□□□ 1.65
VPS36Q86VN1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS36Q86VN1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS36Q86VN1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.33■■□□□ 1.65
VPS36Q86VN1 AC093536.1-201ENST00000569153 554 ntBASIC25.33■■□□□ 1.65
VPS36Q86VN1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS36Q86VN1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.33■■□□□ 1.65
VPS36Q86VN1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.33■■□□□ 1.65
VPS36Q86VN1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS36Q86VN1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
VPS36Q86VN1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.32■■□□□ 1.64
VPS36Q86VN1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS36Q86VN1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms