Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC012676.1-201ENST00000574705 1949 ntBASIC20.59■□□□□ 0.89
LRRTM1Q86UE6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM1Q86UE6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM1Q86UE6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM1Q86UE6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM1Q86UE6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LRRTM1Q86UE6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM1Q86UE6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LRRTM1Q86UE6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM1Q86UE6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM1Q86UE6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM1Q86UE6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM1Q86UE6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.56■□□□□ 0.88
LRRTM1Q86UE6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.56■□□□□ 0.88
LRRTM1Q86UE6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 AC068473.5-201ENST00000616428 2072 ntBASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM1Q86UE6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM1Q86UE6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM1Q86UE6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRTM1Q86UE6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM1Q86UE6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM1Q86UE6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRTM1Q86UE6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM1Q86UE6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRTM1Q86UE6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM1Q86UE6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LRRTM1Q86UE6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LRRTM1Q86UE6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRTM1Q86UE6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRRTM1Q86UE6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM1Q86UE6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRTM1Q86UE6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.48■□□□□ 0.87
LRRTM1Q86UE6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
LRRTM1Q86UE6 AC004812.2-201ENST00000611079 2094 ntBASIC20.48■□□□□ 0.87
LRRTM1Q86UE6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRRTM1Q86UE6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRTM1Q86UE6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LRRTM1Q86UE6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms