Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM71Q2Q1W2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TRIM71Q2Q1W2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM71Q2Q1W2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM71Q2Q1W2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM71Q2Q1W2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM71Q2Q1W2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM71Q2Q1W2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM71Q2Q1W2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM71Q2Q1W2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM71Q2Q1W2 AC131281.2-201ENST00000520478 145 ntBASIC26.23■■□□□ 1.79
TRIM71Q2Q1W2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.22■■□□□ 1.79
TRIM71Q2Q1W2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
TRIM71Q2Q1W2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.21■■□□□ 1.79
TRIM71Q2Q1W2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM71Q2Q1W2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM71Q2Q1W2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
TRIM71Q2Q1W2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM71Q2Q1W2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 AC011551.1-201ENST00000614101 683 ntBASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.2■■□□□ 1.78
TRIM71Q2Q1W2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 MIR638-201ENST00000385237 100 ntBASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.19■■□□□ 1.78
TRIM71Q2Q1W2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 AL117332.1-201ENST00000622628 974 ntBASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
TRIM71Q2Q1W2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM71Q2Q1W2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
TRIM71Q2Q1W2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.17■■□□□ 1.78
TRIM71Q2Q1W2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
TRIM71Q2Q1W2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM71Q2Q1W2 AC142086.6-201ENST00000621154 1765 ntBASIC26.16■■□□□ 1.78
TRIM71Q2Q1W2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM71Q2Q1W2 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.16■■□□□ 1.78
TRIM71Q2Q1W2 AC010997.5-201ENST00000609182 354 ntBASIC26.16■■□□□ 1.78
TRIM71Q2Q1W2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 MIR935-201ENST00000401179 91 ntBASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 MIR3621-201ENST00000580529 85 ntBASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM71Q2Q1W2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.14■■□□□ 1.78
TRIM71Q2Q1W2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.14■■□□□ 1.78
TRIM71Q2Q1W2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
TRIM71Q2Q1W2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM71Q2Q1W2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.14■■□□□ 1.77
TRIM71Q2Q1W2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 AL139246.5-201ENST00000606645 996 ntBASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 MIR6724-1-201ENST00000616420 92 ntBASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 MIR6724-2-201ENST00000616483 92 ntBASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 MIR6724-4-201ENST00000617390 92 ntBASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 MIR6724-3-201ENST00000622482 92 ntBASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM71Q2Q1W2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
TRIM71Q2Q1W2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.12■■□□□ 1.77
TRIM71Q2Q1W2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.12■■□□□ 1.77
TRIM71Q2Q1W2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM71Q2Q1W2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM71Q2Q1W2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.11■■□□□ 1.77
TRIM71Q2Q1W2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM71Q2Q1W2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM71Q2Q1W2 AF131216.4-201ENST00000638924 1588 ntBASIC26.09■■□□□ 1.77
TRIM71Q2Q1W2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM71Q2Q1W2 AL136116.3-201ENST00000402907 1138 ntBASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms