Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC34.78■■■■□ 3.16
SPHKAPQ2M3C7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC34.77■■■■□ 3.16
SPHKAPQ2M3C7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SPHKAPQ2M3C7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC34.77■■■■□ 3.16
SPHKAPQ2M3C7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.76■■■■□ 3.16
SPHKAPQ2M3C7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.76■■■■□ 3.16
SPHKAPQ2M3C7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.76■■■■□ 3.16
SPHKAPQ2M3C7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
SPHKAPQ2M3C7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.15
SPHKAPQ2M3C7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC34.75■■■■□ 3.15
SPHKAPQ2M3C7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
SPHKAPQ2M3C7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
SPHKAPQ2M3C7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
SPHKAPQ2M3C7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
SPHKAPQ2M3C7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
SPHKAPQ2M3C7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
SPHKAPQ2M3C7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
SPHKAPQ2M3C7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.73■■■■□ 3.15
SPHKAPQ2M3C7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SPHKAPQ2M3C7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SPHKAPQ2M3C7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SPHKAPQ2M3C7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.72■■■■□ 3.15
SPHKAPQ2M3C7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
SPHKAPQ2M3C7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC34.7■■■■□ 3.15
SPHKAPQ2M3C7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
SPHKAPQ2M3C7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
SPHKAPQ2M3C7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
SPHKAPQ2M3C7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SPHKAPQ2M3C7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SPHKAPQ2M3C7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.68■■■■□ 3.14
SPHKAPQ2M3C7 AC092028.1-203ENST00000608262 953 ntBASIC34.68■■■■□ 3.14
SPHKAPQ2M3C7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 TSPY9P-201ENST00000440215 945 ntBASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 TSPY11P-201ENST00000442607 1045 ntBASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.67■■■■□ 3.14
SPHKAPQ2M3C7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.66■■■■□ 3.14
SPHKAPQ2M3C7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC34.66■■■■□ 3.14
SPHKAPQ2M3C7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SPHKAPQ2M3C7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SPHKAPQ2M3C7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
SPHKAPQ2M3C7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.64■■■■□ 3.14
SPHKAPQ2M3C7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.63■■■■□ 3.13
SPHKAPQ2M3C7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.63■■■■□ 3.13
SPHKAPQ2M3C7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.63■■■■□ 3.13
SPHKAPQ2M3C7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC34.63■■■■□ 3.13
SPHKAPQ2M3C7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
SPHKAPQ2M3C7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 AL117332.1-201ENST00000622628 974 ntBASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SPHKAPQ2M3C7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
SPHKAPQ2M3C7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
SPHKAPQ2M3C7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC34.61■■■■□ 3.13
SPHKAPQ2M3C7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.61■■■■□ 3.13
SPHKAPQ2M3C7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC34.61■■■■□ 3.13
SPHKAPQ2M3C7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SPHKAPQ2M3C7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
SPHKAPQ2M3C7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.6■■■■□ 3.13
SPHKAPQ2M3C7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.6■■■■□ 3.13
SPHKAPQ2M3C7 AC008406.3-201ENST00000620001 1374 ntBASIC34.6■■■■□ 3.13
SPHKAPQ2M3C7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
SPHKAPQ2M3C7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
SPHKAPQ2M3C7 GAK-223ENST00000628912 497 ntTSL 5 BASIC34.59■■■■□ 3.13
SPHKAPQ2M3C7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
SPHKAPQ2M3C7 AF131216.4-201ENST00000638924 1588 ntBASIC34.58■■■■□ 3.13
SPHKAPQ2M3C7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SPHKAPQ2M3C7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC34.58■■■■□ 3.13
SPHKAPQ2M3C7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
SPHKAPQ2M3C7 AC096887.2-201ENST00000623443 1957 ntBASIC34.57■■■■□ 3.12
SPHKAPQ2M3C7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
SPHKAPQ2M3C7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC34.57■■■■□ 3.12
SPHKAPQ2M3C7 MTDHP2-201ENST00000601468 714 ntBASIC34.56■■■■□ 3.12
SPHKAPQ2M3C7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
SPHKAPQ2M3C7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC34.56■■■■□ 3.12
SPHKAPQ2M3C7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
SPHKAPQ2M3C7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC34.55■■■■□ 3.12
SPHKAPQ2M3C7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.55■■■■□ 3.12
SPHKAPQ2M3C7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SPHKAPQ2M3C7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SPHKAPQ2M3C7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC34.54■■■■□ 3.12
SPHKAPQ2M3C7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms