Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H1AQ02539 AC096887.2-201ENST00000623443 1957 ntBASIC17.99■□□□□ 0.47
HIST1H1AQ02539 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H1AQ02539 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 MIR639-201ENST00000384974 98 ntBASIC17.97■□□□□ 0.47
HIST1H1AQ02539 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H1AQ02539 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 AC060814.1-201ENST00000554326 538 ntBASIC17.96■□□□□ 0.47
HIST1H1AQ02539 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H1AQ02539 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H1AQ02539 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H1AQ02539 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.95■□□□□ 0.46
HIST1H1AQ02539 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H1AQ02539 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H1AQ02539 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.95■□□□□ 0.46
HIST1H1AQ02539 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 AL157400.5-201ENST00000507624 621 ntBASIC17.94■□□□□ 0.46
HIST1H1AQ02539 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 AC022211.4-201ENST00000625094 2161 ntBASIC17.94■□□□□ 0.46
HIST1H1AQ02539 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.94■□□□□ 0.46
HIST1H1AQ02539 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIST1H1AQ02539 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIST1H1AQ02539 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIST1H1AQ02539 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST1H1AQ02539 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.91■□□□□ 0.46
HIST1H1AQ02539 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIST1H1AQ02539 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIST1H1AQ02539 CLDN5-201ENST00000403084 2357 ntBASIC17.9■□□□□ 0.46
HIST1H1AQ02539 AC079834.2-201ENST00000609776 1949 ntBASIC17.9■□□□□ 0.46
HIST1H1AQ02539 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.9■□□□□ 0.46
HIST1H1AQ02539 MIR3960-201ENST00000583311 91 ntBASIC17.9■□□□□ 0.46
HIST1H1AQ02539 AC022413.1-201ENST00000624602 984 ntBASIC17.9■□□□□ 0.46
HIST1H1AQ02539 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST1H1AQ02539 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST1H1AQ02539 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.9■□□□□ 0.46
HIST1H1AQ02539 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIST1H1AQ02539 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.9■□□□□ 0.46
HIST1H1AQ02539 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIST1H1AQ02539 SMPD5-203ENST00000639008 1464 ntBASIC17.89■□□□□ 0.45
HIST1H1AQ02539 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms