Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 PMP3YDR276C 168 nt6.59□□□□□ -1.35
SSL2Q00578 ATO3YDR384C 828 nt6.59□□□□□ -1.35
SSL2Q00578 YOL131WYOL131W 327 nt6.59□□□□□ -1.35
SSL2Q00578 YOR111WYOR111W 699 nt6.59□□□□□ -1.35
SSL2Q00578 RBD2YPL246C 789 nt6.59□□□□□ -1.35
SSL2Q00578 SFB3YHR098C 2790 nt6.59□□□□□ -1.35
SSL2Q00578 EMW1YNL313C 2715 nt6.58□□□□□ -1.36
SSL2Q00578 SLX5YDL013W 1860 nt6.58□□□□□ -1.36
SSL2Q00578 RRP1YDR087C 837 nt6.58□□□□□ -1.36
SSL2Q00578 YER147C-AYER147C-A 411 nt6.58□□□□□ -1.36
SSL2Q00578 RPS2YGL123W 765 nt6.58□□□□□ -1.36
SSL2Q00578 HAP2YGL237C 798 nt6.58□□□□□ -1.36
SSL2Q00578 YHR213W-AYHR213W-A 234 nt6.58□□□□□ -1.36
SSL2Q00578 TDH2YJR009C 999 nt6.58□□□□□ -1.36
SSL2Q00578 STM1YLR150W 822 nt6.58□□□□□ -1.36
SSL2Q00578 YMR306C-AYMR306C-A 390 nt6.58□□□□□ -1.36
SSL2Q00578 YNL042W-BYNL042W-B 258 nt6.58□□□□□ -1.36
SSL2Q00578 TSR3YOR006C 942 nt6.58□□□□□ -1.36
SSL2Q00578 YPK2YMR104C 2034 nt6.57□□□□□ -1.36
SSL2Q00578 YML082WYML082W 1950 nt6.57□□□□□ -1.36
SSL2Q00578 ALD6YPL061W 1503 nt6.57□□□□□ -1.36
SSL2Q00578 DOT5YIL010W 648 nt6.57□□□□□ -1.36
SSL2Q00578 YML018CYML018C 1182 nt6.57□□□□□ -1.36
SSL2Q00578 SCS7YMR272C 1155 nt6.57□□□□□ -1.36
SSL2Q00578 YMR295CYMR295C 594 nt6.57□□□□□ -1.36
SSL2Q00578 CAF40YNL288W 1122 nt6.57□□□□□ -1.36
SSL2Q00578 ERG1YGR175C 1491 nt6.57□□□□□ -1.36
SSL2Q00578 ATP1YBL099W 1638 nt6.57□□□□□ -1.36
SSL2Q00578 IES1YFL013C 2079 nt6.56□□□□□ -1.36
SSL2Q00578 YDR015CYDR015C 240 nt6.56□□□□□ -1.36
SSL2Q00578 DJP1YIR004W 1299 nt6.56□□□□□ -1.36
SSL2Q00578 DRE2YKR071C 1047 nt6.56□□□□□ -1.36
SSL2Q00578 HAP3YBL021C 435 nt6.56□□□□□ -1.36
SSL2Q00578 NDJ1YOL104C 1059 nt6.56□□□□□ -1.36
SSL2Q00578 EPS1YIL005W 2106 nt6.55□□□□□ -1.36
SSL2Q00578 DPB2YPR175W 2070 nt6.55□□□□□ -1.36
SSL2Q00578 COX20YDR231C 618 nt6.55□□□□□ -1.36
SSL2Q00578 RPS5YJR123W 678 nt6.55□□□□□ -1.36
SSL2Q00578 YNL234WYNL234W 1281 nt6.55□□□□□ -1.36
SSL2Q00578 DSF1YEL070W 1509 nt6.55□□□□□ -1.36
SSL2Q00578 YNR073CYNR073C 1509 nt6.55□□□□□ -1.36
SSL2Q00578 GYP1YOR070C 1914 nt6.54□□□□□ -1.36
SSL2Q00578 UTP4YDR324C 2331 nt6.54□□□□□ -1.36
SSL2Q00578 YCR099CYCR099C 468 nt6.54□□□□□ -1.36
SSL2Q00578 MPC1YGL080W 393 nt6.54□□□□□ -1.36
SSL2Q00578 YLL067CYLL067C 3618 nt6.54□□□□□ -1.36
SSL2Q00578 BZZ1YHR114W 1902 nt6.54□□□□□ -1.36
SSL2Q00578 YDL057WYDL057W 987 nt6.53□□□□□ -1.36
SSL2Q00578 YBL070CYBL070C 321 nt6.53□□□□□ -1.36
SSL2Q00578 PRE2YPR103W 864 nt6.53□□□□□ -1.36
SSL2Q00578 ENT2YLR206W 1842 nt6.53□□□□□ -1.36
SSL2Q00578 MSN2YMR037C 2115 nt6.52□□□□□ -1.37
SSL2Q00578 RRP9YPR137W 1722 nt6.51□□□□□ -1.37
SSL2Q00578 YEL075W-AYEL075W-A 612 nt6.51□□□□□ -1.37
SSL2Q00578 CHO1YER026C 831 nt6.51□□□□□ -1.37
SSL2Q00578 SUP19tS(UGA)E 82 nt6.51□□□□□ -1.37
SSL2Q00578 SUP17tS(UGA)I 82 nt6.51□□□□□ -1.37
SSL2Q00578 SUP16tS(UGA)P 82 nt6.51□□□□□ -1.37
SSL2Q00578 TIF2YJL138C 1188 nt6.51□□□□□ -1.37
SSL2Q00578 TIF1YKR059W 1188 nt6.51□□□□□ -1.37
SSL2Q00578 PXL1YKR090W 2121 nt6.51□□□□□ -1.37
SSL2Q00578 YLR463CYLR463C 552 nt6.51□□□□□ -1.37
SSL2Q00578 MRPL24YMR193W 777 nt6.51□□□□□ -1.37
SSL2Q00578 DSE3YOR264W 1293 nt6.51□□□□□ -1.37
SSL2Q00578 CTR1YPR124W 1221 nt6.51□□□□□ -1.37
SSL2Q00578 VPS72YDR485C 2388 nt6.5□□□□□ -1.37
SSL2Q00578 OPI7YDR360W 435 nt6.5□□□□□ -1.37
SSL2Q00578 LYS12YIL094C 1116 nt6.5□□□□□ -1.37
SSL2Q00578 QRI5YLR204W 336 nt6.5□□□□□ -1.37
SSL2Q00578 MRPL10YNL284C 969 nt6.5□□□□□ -1.37
SSL2Q00578 PAP1YKR002W 1707 nt6.5□□□□□ -1.37
SSL2Q00578 GSY2YLR258W 2118 nt6.49□□□□□ -1.37
SSL2Q00578 SUA5YGL169W 1281 nt6.49□□□□□ -1.37
SSL2Q00578 KSS1YGR040W 1107 nt6.49□□□□□ -1.37
SSL2Q00578 GFD1YMR255W 567 nt6.49□□□□□ -1.37
SSL2Q00578 MRI1YPR118W 1236 nt6.49□□□□□ -1.37
SSL2Q00578 TNA1YGR260W 1605 nt6.49□□□□□ -1.37
SSL2Q00578 PDR18YNR070W 4002 nt6.49□□□□□ -1.37
SSL2Q00578 YER186CYER186C 921 nt6.48□□□□□ -1.37
SSL2Q00578 TFG2YGR005C 1203 nt6.48□□□□□ -1.37
SSL2Q00578 YIR017W-AYIR017W-A 600 nt6.48□□□□□ -1.37
SSL2Q00578 CCP1YKR066C 1086 nt6.48□□□□□ -1.37
SSL2Q00578 UBC11YOR339C 471 nt6.48□□□□□ -1.37
SSL2Q00578 GPB2YAL056W 2643 nt6.48□□□□□ -1.37
SSL2Q00578 AVO1YOL078W 3531 nt6.48□□□□□ -1.37
SSL2Q00578 YIL092WYIL092W 1902 nt6.48□□□□□ -1.37
SSL2Q00578 IRS4YKR019C 1848 nt6.48□□□□□ -1.37
SSL2Q00578 NPA3YJR072C 1158 nt6.47□□□□□ -1.37
SSL2Q00578 CIN4YMR138W 576 nt6.47□□□□□ -1.37
SSL2Q00578 SSK1YLR006C 2139 nt6.47□□□□□ -1.37
SSL2Q00578 BPL1YDL141W 2073 nt6.46□□□□□ -1.37
SSL2Q00578 NMT1YLR195C 1368 nt6.46□□□□□ -1.37
SSL2Q00578 SEC18YBR080C 2277 nt6.46□□□□□ -1.37
SSL2Q00578 TFB4YPR056W 1017 nt6.46□□□□□ -1.38
SSL2Q00578 AMD1YML035C 2433 nt6.46□□□□□ -1.38
SSL2Q00578 ALT2YDR111C 1524 nt6.45□□□□□ -1.38
SSL2Q00578 ATG23YLR431C 1362 nt6.45□□□□□ -1.38
SSL2Q00578 HSF1YGL073W 2502 nt6.45□□□□□ -1.38
SSL2Q00578 ASH1YKL185W 1767 nt6.45□□□□□ -1.38
SSL2Q00578 RAI1YGL246C 1164 nt6.45□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms