Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS3P61009 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SPCS3P61009 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS3P61009 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS3P61009 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS3P61009 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS3P61009 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPCS3P61009 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SPCS3P61009 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPCS3P61009 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPCS3P61009 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPCS3P61009 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPCS3P61009 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.14■□□□□ 0.65
SPCS3P61009 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPCS3P61009 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SPCS3P61009 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.14■□□□□ 0.65
SPCS3P61009 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPCS3P61009 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPCS3P61009 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.13■□□□□ 0.65
SPCS3P61009 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SPCS3P61009 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SPCS3P61009 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPCS3P61009 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPCS3P61009 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPCS3P61009 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS3P61009 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.12■□□□□ 0.65
SPCS3P61009 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS3P61009 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
SPCS3P61009 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS3P61009 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.12■□□□□ 0.65
SPCS3P61009 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.12■□□□□ 0.65
SPCS3P61009 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SPCS3P61009 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPCS3P61009 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS3P61009 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS3P61009 LINC01124-201ENST00000409786 2117 ntBASIC19.11■□□□□ 0.65
SPCS3P61009 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS3P61009 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS3P61009 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SPCS3P61009 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS3P61009 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPCS3P61009 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.1■□□□□ 0.65
SPCS3P61009 SLC6A10P-202ENST00000431994 2058 ntBASIC19.1■□□□□ 0.65
SPCS3P61009 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SPCS3P61009 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.1■□□□□ 0.65
SPCS3P61009 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPCS3P61009 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS3P61009 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS3P61009 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.09■□□□□ 0.65
SPCS3P61009 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SPCS3P61009 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS3P61009 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SPCS3P61009 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS3P61009 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS3P61009 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPCS3P61009 ZNRF2P2-203ENST00000454624 420 ntBASIC19.09■□□□□ 0.65
SPCS3P61009 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.09■□□□□ 0.65
SPCS3P61009 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.09■□□□□ 0.65
SPCS3P61009 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SPCS3P61009 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
SPCS3P61009 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPCS3P61009 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.08■□□□□ 0.64
SPCS3P61009 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPCS3P61009 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPCS3P61009 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.08■□□□□ 0.64
SPCS3P61009 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SPCS3P61009 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPCS3P61009 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SPCS3P61009 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPCS3P61009 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.07■□□□□ 0.64
SPCS3P61009 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SPCS3P61009 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SPCS3P61009 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPCS3P61009 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SPCS3P61009 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 AC012676.1-201ENST00000574705 1949 ntBASIC19.06■□□□□ 0.64
SPCS3P61009 AC079834.2-201ENST00000609776 1949 ntBASIC19.06■□□□□ 0.64
SPCS3P61009 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.06■□□□□ 0.64
SPCS3P61009 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.06■□□□□ 0.64
SPCS3P61009 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPCS3P61009 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SPCS3P61009 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms