Protein–RNA interactions for Protein: P56181

NDUFV3, NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3P56181 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDUFV3P56181 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NDUFV3P56181 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDUFV3P56181 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDUFV3P56181 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFV3P56181 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NDUFV3P56181 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NDUFV3P56181 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFV3P56181 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFV3P56181 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 DUSP8P5-201ENST00000422884 1815 ntBASIC15.28■□□□□ 0.04
NDUFV3P56181 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFV3P56181 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFV3P56181 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NDUFV3P56181 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.27■□□□□ 0.04
NDUFV3P56181 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NDUFV3P56181 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFV3P56181 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFV3P56181 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.27■□□□□ 0.04
NDUFV3P56181 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFV3P56181 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFV3P56181 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFV3P56181 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NDUFV3P56181 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFV3P56181 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NDUFV3P56181 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFV3P56181 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFV3P56181 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NDUFV3P56181 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFV3P56181 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDUFV3P56181 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFV3P56181 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDUFV3P56181 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFV3P56181 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFV3P56181 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NDUFV3P56181 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFV3P56181 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NDUFV3P56181 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFV3P56181 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NDUFV3P56181 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 AC142381.3-201ENST00000568208 1670 ntBASIC15.25■□□□□ 0.03
NDUFV3P56181 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFV3P56181 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NDUFV3P56181 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NDUFV3P56181 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFV3P56181 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFV3P56181 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFV3P56181 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFV3P56181 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC15.23■□□□□ 0.03
NDUFV3P56181 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.23■□□□□ 0.03
NDUFV3P56181 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NDUFV3P56181 AP004609.3-201ENST00000610705 1884 ntBASIC15.23■□□□□ 0.03
NDUFV3P56181 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NDUFV3P56181 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFV3P56181 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFV3P56181 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFV3P56181 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFV3P56181 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFV3P56181 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC15.22■□□□□ 0.03
NDUFV3P56181 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFV3P56181 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFV3P56181 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFV3P56181 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms