Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 PFA3YNL326C 1011 nt5.97□□□□□ -1.45
YNL040WP53960 ENT2YLR206W 1842 nt5.97□□□□□ -1.45
YNL040WP53960 GSY2YLR258W 2118 nt5.96□□□□□ -1.45
YNL040WP53960 GLE1YDL207W 1617 nt5.96□□□□□ -1.45
YNL040WP53960 MKK2YPL140C 1521 nt5.96□□□□□ -1.46
YNL040WP53960 ATO3YDR384C 828 nt5.96□□□□□ -1.46
YNL040WP53960 RRP4YHR069C 1080 nt5.96□□□□□ -1.46
YNL040WP53960 YKL223WYKL223W 333 nt5.96□□□□□ -1.46
YNL040WP53960 QDR3YBR043C 2070 nt5.95□□□□□ -1.46
YNL040WP53960 AMD1YML035C 2433 nt5.95□□□□□ -1.46
YNL040WP53960 YDL057WYDL057W 987 nt5.95□□□□□ -1.46
YNL040WP53960 YDL114WYDL114W 927 nt5.95□□□□□ -1.46
YNL040WP53960 APS3YJL024C 585 nt5.95□□□□□ -1.46
YNL040WP53960 SHP1YBL058W 1272 nt5.95□□□□□ -1.46
YNL040WP53960 YOR300WYOR300W 309 nt5.95□□□□□ -1.46
YNL040WP53960 YPL041CYPL041C 624 nt5.95□□□□□ -1.46
YNL040WP53960 LSG1YGL099W 1923 nt5.95□□□□□ -1.46
YNL040WP53960 RET1YOR207C 3450 nt5.94□□□□□ -1.46
YNL040WP53960 HSF1YGL073W 2502 nt5.94□□□□□ -1.46
YNL040WP53960 YRF1-4YLR466W 4149 nt5.94□□□□□ -1.46
YNL040WP53960 RBD2YPL246C 789 nt5.94□□□□□ -1.46
YNL040WP53960 TBF1YPL128C 1689 nt5.94□□□□□ -1.46
YNL040WP53960 GYP1YOR070C 1914 nt5.93□□□□□ -1.46
YNL040WP53960 PUF3YLL013C 2640 nt5.93□□□□□ -1.46
YNL040WP53960 SAC6YDR129C 1929 nt5.92□□□□□ -1.46
YNL040WP53960 YEA6YEL006W 1008 nt5.92□□□□□ -1.46
YNL040WP53960 YER010CYER010C 705 nt5.92□□□□□ -1.46
YNL040WP53960 AIM3YBR108W 2844 nt5.92□□□□□ -1.46
YNL040WP53960 VNX1YNL321W 2727 nt5.91□□□□□ -1.46
YNL040WP53960 SNO4YMR322C 714 nt5.91□□□□□ -1.46
YNL040WP53960 POR1YNL055C 852 nt5.91□□□□□ -1.46
YNL040WP53960 HSP33YOR391C 714 nt5.91□□□□□ -1.46
YNL040WP53960 HSP32YPL280W 714 nt5.91□□□□□ -1.46
YNL040WP53960 MLC2YPR188C 492 nt5.91□□□□□ -1.46
YNL040WP53960 NMT1YLR195C 1368 nt5.91□□□□□ -1.46
YNL040WP53960 RIM101YHL027W 1878 nt5.9□□□□□ -1.46
YNL040WP53960 YME1YPR024W 2244 nt5.9□□□□□ -1.46
YNL040WP53960 YCL065WYCL065W 369 nt5.9□□□□□ -1.46
YNL040WP53960 YRA1YDR381W 681 nt5.9□□□□□ -1.46
YNL040WP53960 GFD1YMR255W 567 nt5.9□□□□□ -1.46
YNL040WP53960 CSG2YBR036C 1233 nt5.9□□□□□ -1.46
YNL040WP53960 IDP1YDL066W 1287 nt5.89□□□□□ -1.47
YNL040WP53960 YIL077CYIL077C 963 nt5.89□□□□□ -1.47
YNL040WP53960 PRP46YPL151C 1356 nt5.89□□□□□ -1.47
YNL040WP53960 QNS1YHR074W 2145 nt5.89□□□□□ -1.47
YNL040WP53960 MID1YNL291C 1647 nt5.88□□□□□ -1.47
YNL040WP53960 ASH1YKL185W 1767 nt5.88□□□□□ -1.47
YNL040WP53960 YCR047W-AYCR047W-A 207 nt5.88□□□□□ -1.47
YNL040WP53960 MDH3YDL078C 1032 nt5.88□□□□□ -1.47
YNL040WP53960 YHC3YJL059W 1227 nt5.88□□□□□ -1.47
YNL040WP53960 YBR124WYBR124W 360 nt5.88□□□□□ -1.47
YNL040WP53960 GPA1YHR005C 1419 nt5.88□□□□□ -1.47
YNL040WP53960 SIP2YGL208W 1248 nt5.87□□□□□ -1.47
YNL040WP53960 EGD2YHR193C 525 nt5.87□□□□□ -1.47
YNL040WP53960 SFC1YJR095W 969 nt5.87□□□□□ -1.47
YNL040WP53960 RRT2YBR246W 1164 nt5.87□□□□□ -1.47
YNL040WP53960 ORC5YNL261W 1440 nt5.87□□□□□ -1.47
YNL040WP53960 TRP3YKL211C 1455 nt5.87□□□□□ -1.47
YNL040WP53960 SMF2YHR050W 1650 nt5.87□□□□□ -1.47
YNL040WP53960 GFA1YKL104C 2154 nt5.87□□□□□ -1.47
YNL040WP53960 HIS7YBR248C 1659 nt5.86□□□□□ -1.47
YNL040WP53960 CWC21YDR482C 408 nt5.86□□□□□ -1.47
YNL040WP53960 SNZ3YFL059W 897 nt5.86□□□□□ -1.47
YNL040WP53960 PAN6YIL145C 930 nt5.86□□□□□ -1.47
YNL040WP53960 YLR317WYLR317W 435 nt5.86□□□□□ -1.47
YNL040WP53960 SNZ2YNL333W 897 nt5.86□□□□□ -1.47
YNL040WP53960 SSK1YLR006C 2139 nt5.86□□□□□ -1.47
YNL040WP53960 SYF2YGR129W 648 nt5.85□□□□□ -1.47
YNL040WP53960 HSP104YLL026W 2727 nt5.85□□□□□ -1.47
YNL040WP53960 RFA1YAR007C 1866 nt5.85□□□□□ -1.47
YNL040WP53960 YEL020CYEL020C 1683 nt5.85□□□□□ -1.47
YNL040WP53960 RHO2YNL090W 579 nt5.84□□□□□ -1.47
YNL040WP53960 CSL4YNL232W 879 nt5.84□□□□□ -1.47
YNL040WP53960 YBR056C-BYBR056C-B 159 nt5.84□□□□□ -1.47
YNL040WP53960 DBP9YLR276C 1785 nt5.84□□□□□ -1.47
YNL040WP53960 SHM1YBR263W 1473 nt5.83□□□□□ -1.48
YNL040WP53960 CLP1YOR250C 1338 nt5.83□□□□□ -1.48
YNL040WP53960 VCX1YDL128W 1236 nt5.83□□□□□ -1.48
YNL040WP53960 SKN1YGR143W 2316 nt5.83□□□□□ -1.48
YNL040WP53960 MKK1YOR231W 1527 nt5.83□□□□□ -1.48
YNL040WP53960 YDL172CYDL172C 480 nt5.82□□□□□ -1.48
YNL040WP53960 YDR154CYDR154C 351 nt5.82□□□□□ -1.48
YNL040WP53960 PSH1YOL054W 1221 nt5.82□□□□□ -1.48
YNL040WP53960 EHD3YDR036C 1503 nt5.82□□□□□ -1.48
YNL040WP53960 BUL1YMR275C 2931 nt5.81□□□□□ -1.48
YNL040WP53960 YDR053WYDR053W 396 nt5.81□□□□□ -1.48
YNL040WP53960 HGH1YGR187C 1185 nt5.81□□□□□ -1.48
YNL040WP53960 STL1YDR536W 1710 nt5.8□□□□□ -1.48
YNL040WP53960 DON1YDR273W 1098 nt5.8□□□□□ -1.48
YNL040WP53960 ERP5YHR110W 639 nt5.8□□□□□ -1.48
YNL040WP53960 LST8YNL006W 912 nt5.8□□□□□ -1.48
YNL040WP53960 YPR098CYPR098C 486 nt5.8□□□□□ -1.48
YNL040WP53960 GEX1YCL073C 1848 nt5.8□□□□□ -1.48
YNL040WP53960 GEX2YKR106W 1848 nt5.8□□□□□ -1.48
YNL040WP53960 MTF2YDL044C 1323 nt5.79□□□□□ -1.48
YNL040WP53960 YKL031WYKL031W 414 nt5.79□□□□□ -1.48
YNL040WP53960 HCR1YLR192C 798 nt5.79□□□□□ -1.48
YNL040WP53960 SSP120YLR250W 705 nt5.79□□□□□ -1.48
YNL040WP53960 MRPL22YNL177C 930 nt5.79□□□□□ -1.48
YNL040WP53960 PDH1YPR002W 1551 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms