Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SRP9P49458 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.9■□□□□ 0.94
SRP9P49458 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP9P49458 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SRP9P49458 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.9■□□□□ 0.94
SRP9P49458 AC012676.1-201ENST00000574705 1949 ntBASIC20.9■□□□□ 0.94
SRP9P49458 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRP9P49458 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SRP9P49458 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRP9P49458 RNF126P1-201ENST00000567452 1320 ntBASIC20.89■□□□□ 0.93
SRP9P49458 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRP9P49458 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRP9P49458 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRP9P49458 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRP9P49458 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRP9P49458 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.88■□□□□ 0.93
SRP9P49458 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.88■□□□□ 0.93
SRP9P49458 AL157400.5-201ENST00000507624 621 ntBASIC20.88■□□□□ 0.93
SRP9P49458 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.88■□□□□ 0.93
SRP9P49458 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRP9P49458 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SRP9P49458 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP9P49458 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.87■□□□□ 0.93
SRP9P49458 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP9P49458 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.86■□□□□ 0.93
SRP9P49458 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.86■□□□□ 0.93
SRP9P49458 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.86■□□□□ 0.93
SRP9P49458 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP9P49458 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRP9P49458 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.85■□□□□ 0.93
SRP9P49458 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP9P49458 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP9P49458 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP9P49458 AL359504.2-201ENST00000605506 1601 ntBASIC20.85■□□□□ 0.93
SRP9P49458 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.85■□□□□ 0.93
SRP9P49458 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRP9P49458 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRP9P49458 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.84■□□□□ 0.93
SRP9P49458 SMPD5-203ENST00000639008 1464 ntBASIC20.84■□□□□ 0.93
SRP9P49458 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP9P49458 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.84■□□□□ 0.93
SRP9P49458 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP9P49458 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRP9P49458 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRP9P49458 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRP9P49458 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRP9P49458 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.83■□□□□ 0.93
SRP9P49458 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRP9P49458 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRP9P49458 AC068473.5-201ENST00000616428 2072 ntBASIC20.82■□□□□ 0.92
SRP9P49458 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP9P49458 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SRP9P49458 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SRP9P49458 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP9P49458 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP9P49458 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP9P49458 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.82■□□□□ 0.92
SRP9P49458 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP9P49458 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.81■□□□□ 0.92
SRP9P49458 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SRP9P49458 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.81■□□□□ 0.92
SRP9P49458 RARRES2P2-201ENST00000394842 485 ntBASIC20.8■□□□□ 0.92
SRP9P49458 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.8■□□□□ 0.92
SRP9P49458 AC025884.2-201ENST00000553429 711 ntBASIC20.8■□□□□ 0.92
SRP9P49458 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP9P49458 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRP9P49458 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.79■□□□□ 0.92
SRP9P49458 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRP9P49458 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRP9P49458 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.79■□□□□ 0.92
SRP9P49458 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.79■□□□□ 0.92
SRP9P49458 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
SRP9P49458 MIR3960-201ENST00000583311 91 ntBASIC20.79■□□□□ 0.92
SRP9P49458 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRP9P49458 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.78■□□□□ 0.92
SRP9P49458 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRP9P49458 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRP9P49458 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP9P49458 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SRP9P49458 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.77■□□□□ 0.92
SRP9P49458 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRP9P49458 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP9P49458 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRP9P49458 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRP9P49458 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRP9P49458 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP9P49458 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms