Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD40P25942 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD40P25942 KRT18P24-201ENST00000344739 1156 ntBASIC20.56■□□□□ 0.88
CD40P25942 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CD40P25942 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD40P25942 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CD40P25942 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD40P25942 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD40P25942 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CD40P25942 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD40P25942 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.55■□□□□ 0.88
CD40P25942 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.55■□□□□ 0.88
CD40P25942 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD40P25942 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD40P25942 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.54■□□□□ 0.88
CD40P25942 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CD40P25942 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD40P25942 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.54■□□□□ 0.88
CD40P25942 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD40P25942 THA1P-201ENST00000590384 1145 ntBASIC20.54■□□□□ 0.88
CD40P25942 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD40P25942 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CD40P25942 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD40P25942 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD40P25942 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.53■□□□□ 0.88
CD40P25942 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.53■□□□□ 0.88
CD40P25942 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.53■□□□□ 0.88
CD40P25942 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
CD40P25942 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD40P25942 AC096887.2-201ENST00000623443 1957 ntBASIC20.52■□□□□ 0.88
CD40P25942 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD40P25942 AC120024.1-201ENST00000562672 995 ntBASIC20.52■□□□□ 0.88
CD40P25942 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD40P25942 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CD40P25942 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.52■□□□□ 0.87
CD40P25942 AC010501.1-201ENST00000606270 1962 ntBASIC20.52■□□□□ 0.87
CD40P25942 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD40P25942 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD40P25942 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
CD40P25942 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD40P25942 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CD40P25942 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.51■□□□□ 0.87
CD40P25942 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.51■□□□□ 0.87
CD40P25942 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.51■□□□□ 0.87
CD40P25942 AC092803.2-201ENST00000564287 1899 ntBASIC20.51■□□□□ 0.87
CD40P25942 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD40P25942 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD40P25942 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD40P25942 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD40P25942 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD40P25942 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.5■□□□□ 0.87
CD40P25942 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD40P25942 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CD40P25942 Z92544.1-202ENST00000571933 1220 ntBASIC20.5■□□□□ 0.87
CD40P25942 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD40P25942 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD40P25942 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD40P25942 AC239859.2-201ENST00000444165 318 ntBASIC20.49■□□□□ 0.87
CD40P25942 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.49■□□□□ 0.87
CD40P25942 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.49■□□□□ 0.87
CD40P25942 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD40P25942 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CD40P25942 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CD40P25942 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 AC097639.1-201ENST00000565519 1891 ntBASIC20.48■□□□□ 0.87
CD40P25942 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.48■□□□□ 0.87
CD40P25942 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 GUSBP5-201ENST00000418136 578 ntBASIC20.48■□□□□ 0.87
CD40P25942 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CD40P25942 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.48■□□□□ 0.87
CD40P25942 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD40P25942 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD40P25942 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD40P25942 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD40P25942 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD40P25942 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.47■□□□□ 0.87
CD40P25942 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD40P25942 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD40P25942 BX664725.1-201ENST00000438252 379 ntBASIC20.46■□□□□ 0.87
CD40P25942 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.46■□□□□ 0.87
CD40P25942 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.46■□□□□ 0.87
CD40P25942 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD40P25942 FOXO3B-201ENST00000395675 1928 ntBASIC20.46■□□□□ 0.87
CD40P25942 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD40P25942 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD40P25942 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD40P25942 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD40P25942 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD40P25942 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms