Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRKCAP17252 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.8■■□□□ 1.08
PRKCAP17252 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRKCAP17252 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
PRKCAP17252 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PRKCAP17252 NTF6A-201ENST00000591175 560 ntBASIC21.8■■□□□ 1.08
PRKCAP17252 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.8■■□□□ 1.08
PRKCAP17252 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRKCAP17252 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRKCAP17252 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRKCAP17252 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.79■■□□□ 1.08
PRKCAP17252 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRKCAP17252 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.79■■□□□ 1.08
PRKCAP17252 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.79■■□□□ 1.08
PRKCAP17252 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRKCAP17252 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRKCAP17252 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.78■■□□□ 1.08
PRKCAP17252 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PRKCAP17252 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.78■■□□□ 1.08
PRKCAP17252 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.78■■□□□ 1.08
PRKCAP17252 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PRKCAP17252 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
PRKCAP17252 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PRKCAP17252 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRKCAP17252 KRT18P60-201ENST00000312876 1297 ntBASIC21.77■■□□□ 1.08
PRKCAP17252 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.77■■□□□ 1.08
PRKCAP17252 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRKCAP17252 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PRKCAP17252 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRKCAP17252 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.77■■□□□ 1.07
PRKCAP17252 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PRKCAP17252 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRKCAP17252 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRKCAP17252 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRKCAP17252 AC020928.2-201ENST00000588717 2197 ntBASIC21.76■■□□□ 1.07
PRKCAP17252 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PRKCAP17252 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.76■■□□□ 1.07
PRKCAP17252 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRKCAP17252 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRKCAP17252 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRKCAP17252 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PRKCAP17252 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRKCAP17252 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PRKCAP17252 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRKCAP17252 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.75■■□□□ 1.07
PRKCAP17252 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKCAP17252 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.75■■□□□ 1.07
PRKCAP17252 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKCAP17252 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKCAP17252 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKCAP17252 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.74■■□□□ 1.07
PRKCAP17252 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PRKCAP17252 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRKCAP17252 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRKCAP17252 SPCS2P3-201ENST00000500401 656 ntBASIC21.74■■□□□ 1.07
PRKCAP17252 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRKCAP17252 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRKCAP17252 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRKCAP17252 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PRKCAP17252 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRKCAP17252 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRKCAP17252 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRKCAP17252 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRKCAP17252 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.73■■□□□ 1.07
PRKCAP17252 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRKCAP17252 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.73■■□□□ 1.07
PRKCAP17252 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKCAP17252 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PRKCAP17252 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKCAP17252 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKCAP17252 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKCAP17252 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PRKCAP17252 AC129492.7-201ENST00000622992 756 ntBASIC21.72■■□□□ 1.07
PRKCAP17252 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.72■■□□□ 1.07
PRKCAP17252 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRKCAP17252 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKCAP17252 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PRKCAP17252 DUX4L9-201ENST00000449051 1259 ntBASIC21.71■■□□□ 1.07
PRKCAP17252 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRKCAP17252 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKCAP17252 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKCAP17252 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRKCAP17252 AC133561.1-201ENST00000568600 2415 ntBASIC21.7■■□□□ 1.06
PRKCAP17252 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRKCAP17252 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRKCAP17252 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.7■■□□□ 1.06
PRKCAP17252 AC018755.3-202ENST00000596210 929 ntBASIC21.7■■□□□ 1.06
PRKCAP17252 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRKCAP17252 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRKCAP17252 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRKCAP17252 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRKCAP17252 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRKCAP17252 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.69■■□□□ 1.06
PRKCAP17252 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRKCAP17252 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRKCAP17252 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRKCAP17252 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
PRKCAP17252 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRKCAP17252 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
PRKCAP17252 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms