Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL117332.1-201ENST00000622628 974 ntBASIC27.2■■□□□ 1.94
HOXC6P09630 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HOXC6P09630 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
HOXC6P09630 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
HOXC6P09630 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HOXC6P09630 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
HOXC6P09630 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.19■■□□□ 1.94
HOXC6P09630 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.19■■□□□ 1.94
HOXC6P09630 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
HOXC6P09630 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.19■■□□□ 1.94
HOXC6P09630 AC142086.6-201ENST00000621154 1765 ntBASIC27.18■■□□□ 1.94
HOXC6P09630 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
HOXC6P09630 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
HOXC6P09630 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.18■■□□□ 1.94
HOXC6P09630 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.17■■□□□ 1.94
HOXC6P09630 AC010997.5-201ENST00000609182 354 ntBASIC27.17■■□□□ 1.94
HOXC6P09630 AC011551.1-201ENST00000614101 683 ntBASIC27.17■■□□□ 1.94
HOXC6P09630 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
HOXC6P09630 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.17■■□□□ 1.94
HOXC6P09630 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
HOXC6P09630 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.16■■□□□ 1.94
HOXC6P09630 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.16■■□□□ 1.94
HOXC6P09630 MIR6724-1-201ENST00000616420 92 ntBASIC27.16■■□□□ 1.94
HOXC6P09630 MIR6724-2-201ENST00000616483 92 ntBASIC27.16■■□□□ 1.94
HOXC6P09630 MIR6724-4-201ENST00000617390 92 ntBASIC27.16■■□□□ 1.94
HOXC6P09630 MIR6724-3-201ENST00000622482 92 ntBASIC27.16■■□□□ 1.94
HOXC6P09630 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.16■■□□□ 1.94
HOXC6P09630 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
HOXC6P09630 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HOXC6P09630 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
HOXC6P09630 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.16■■□□□ 1.94
HOXC6P09630 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
HOXC6P09630 AL136116.3-201ENST00000402907 1138 ntBASIC27.15■■□□□ 1.94
HOXC6P09630 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
HOXC6P09630 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HOXC6P09630 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.14■■□□□ 1.94
HOXC6P09630 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
HOXC6P09630 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
HOXC6P09630 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.14■■□□□ 1.94
HOXC6P09630 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
HOXC6P09630 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
HOXC6P09630 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.14■■□□□ 1.94
HOXC6P09630 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
HOXC6P09630 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.13■■□□□ 1.93
HOXC6P09630 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.13■■□□□ 1.93
HOXC6P09630 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
HOXC6P09630 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.13■■□□□ 1.93
HOXC6P09630 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.13■■□□□ 1.93
HOXC6P09630 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HOXC6P09630 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
HOXC6P09630 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
HOXC6P09630 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HOXC6P09630 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.12■■□□□ 1.93
HOXC6P09630 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.12■■□□□ 1.93
HOXC6P09630 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
HOXC6P09630 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HOXC6P09630 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.12■■□□□ 1.93
HOXC6P09630 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
HOXC6P09630 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
HOXC6P09630 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.12■■□□□ 1.93
HOXC6P09630 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HOXC6P09630 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HOXC6P09630 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.11■■□□□ 1.93
HOXC6P09630 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.11■■□□□ 1.93
HOXC6P09630 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
HOXC6P09630 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
HOXC6P09630 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HOXC6P09630 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HOXC6P09630 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.1■■□□□ 1.93
HOXC6P09630 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.1■■□□□ 1.93
HOXC6P09630 MTDHP2-201ENST00000601468 714 ntBASIC27.1■■□□□ 1.93
HOXC6P09630 AC110285.6-201ENST00000617652 491 ntBASIC27.1■■□□□ 1.93
HOXC6P09630 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
HOXC6P09630 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.09■■□□□ 1.93
HOXC6P09630 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HOXC6P09630 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
HOXC6P09630 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
HOXC6P09630 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.08■■□□□ 1.93
HOXC6P09630 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
HOXC6P09630 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.08■■□□□ 1.93
HOXC6P09630 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 AP004609.3-201ENST00000610705 1884 ntBASIC27.07■■□□□ 1.92
HOXC6P09630 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.07■■□□□ 1.92
HOXC6P09630 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 AL356740.2-201ENST00000601559 647 ntBASIC27.07■■□□□ 1.92
HOXC6P09630 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.07■■□□□ 1.92
HOXC6P09630 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.07■■□□□ 1.92
HOXC6P09630 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
HOXC6P09630 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
HOXC6P09630 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
HOXC6P09630 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
HOXC6P09630 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.06■■□□□ 1.92
HOXC6P09630 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.06■■□□□ 1.92
HOXC6P09630 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
HOXC6P09630 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.05■■□□□ 1.92
HOXC6P09630 MIR4466-201ENST00000606121 54 ntBASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms