Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MT-ND4P03905 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND4P03905 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND4P03905 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND4P03905 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND4P03905 MIR219A2-201ENST00000608502 1504 ntBASIC20.51■□□□□ 0.87
MT-ND4P03905 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND4P03905 AC096887.2-201ENST00000623443 1957 ntBASIC20.5■□□□□ 0.87
MT-ND4P03905 CLDN5-201ENST00000403084 2357 ntBASIC20.5■□□□□ 0.87
MT-ND4P03905 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-ND4P03905 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.5■□□□□ 0.87
MT-ND4P03905 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.5■□□□□ 0.87
MT-ND4P03905 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND4P03905 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
MT-ND4P03905 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND4P03905 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND4P03905 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.49■□□□□ 0.87
MT-ND4P03905 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.49■□□□□ 0.87
MT-ND4P03905 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND4P03905 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND4P03905 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND4P03905 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND4P03905 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-ND4P03905 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-ND4P03905 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND4P03905 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-ND4P03905 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND4P03905 ABHD17AP4-201ENST00000411545 909 ntBASIC20.48■□□□□ 0.87
MT-ND4P03905 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-ND4P03905 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-ND4P03905 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-ND4P03905 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-ND4P03905 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-ND4P03905 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND4P03905 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND4P03905 HLA-V-202ENST00000446817 847 ntBASIC20.47■□□□□ 0.87
MT-ND4P03905 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-ND4P03905 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND4P03905 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND4P03905 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND4P03905 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.46■□□□□ 0.87
MT-ND4P03905 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND4P03905 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND4P03905 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND4P03905 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND4P03905 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND4P03905 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
MT-ND4P03905 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.45■□□□□ 0.86
MT-ND4P03905 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
MT-ND4P03905 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND4P03905 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND4P03905 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND4P03905 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND4P03905 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND4P03905 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND4P03905 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND4P03905 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND4P03905 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
MT-ND4P03905 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.44■□□□□ 0.86
MT-ND4P03905 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-ND4P03905 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND4P03905 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MT-ND4P03905 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 AP003733.4-201ENST00000623785 1697 ntBASIC20.43■□□□□ 0.86
MT-ND4P03905 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.43■□□□□ 0.86
MT-ND4P03905 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND4P03905 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-ND4P03905 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND4P03905 DUSP8P5-201ENST00000422884 1815 ntBASIC20.42■□□□□ 0.86
MT-ND4P03905 CR559946.2-201ENST00000623684 991 ntBASIC20.42■□□□□ 0.86
MT-ND4P03905 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND4P03905 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.42■□□□□ 0.86
MT-ND4P03905 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND4P03905 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND4P03905 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MT-ND4P03905 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
MT-ND4P03905 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms