Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NGFP01138 RPS2P7-201ENST00000447334 885 ntBASIC20.56■□□□□ 0.88
NGFP01138 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NGFP01138 AC012354.3-201ENST00000623734 483 ntBASIC20.56■□□□□ 0.88
NGFP01138 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NGFP01138 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NGFP01138 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.55■□□□□ 0.88
NGFP01138 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NGFP01138 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NGFP01138 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
NGFP01138 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.55■□□□□ 0.88
NGFP01138 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NGFP01138 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.55■□□□□ 0.88
NGFP01138 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NGFP01138 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
NGFP01138 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.54■□□□□ 0.88
NGFP01138 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.54■□□□□ 0.88
NGFP01138 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 TSPY13P-201ENST00000338964 914 ntBASIC20.54■□□□□ 0.88
NGFP01138 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NGFP01138 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
NGFP01138 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.53■□□□□ 0.88
NGFP01138 AL033527.3-201ENST00000566366 1196 ntBASIC20.53■□□□□ 0.88
NGFP01138 AC087393.1-201ENST00000582896 145 ntBASIC20.53■□□□□ 0.88
NGFP01138 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NGFP01138 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NGFP01138 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.52■□□□□ 0.88
NGFP01138 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NGFP01138 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NGFP01138 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NGFP01138 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NGFP01138 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NGFP01138 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.51■□□□□ 0.87
NGFP01138 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
NGFP01138 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NGFP01138 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NGFP01138 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NGFP01138 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NGFP01138 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NGFP01138 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NGFP01138 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.5■□□□□ 0.87
NGFP01138 SLC6A10P-202ENST00000431994 2058 ntBASIC20.5■□□□□ 0.87
NGFP01138 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NGFP01138 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NGFP01138 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NGFP01138 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NGFP01138 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NGFP01138 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NGFP01138 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NGFP01138 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.48■□□□□ 0.87
NGFP01138 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NGFP01138 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.48■□□□□ 0.87
NGFP01138 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NGFP01138 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.48■□□□□ 0.87
NGFP01138 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NGFP01138 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NGFP01138 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NGFP01138 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NGFP01138 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.48■□□□□ 0.87
NGFP01138 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NGFP01138 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.47■□□□□ 0.87
NGFP01138 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NGFP01138 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NGFP01138 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NGFP01138 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NGFP01138 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NGFP01138 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NGFP01138 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NGFP01138 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.46■□□□□ 0.87
NGFP01138 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.46■□□□□ 0.87
NGFP01138 AC139795.1-202ENST00000500444 432 ntBASIC20.46■□□□□ 0.87
NGFP01138 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.46■□□□□ 0.87
NGFP01138 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NGFP01138 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
NGFP01138 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NGFP01138 BHLHE23-202ENST00000612929 1109 ntBASIC20.45■□□□□ 0.86
NGFP01138 AC022211.4-201ENST00000625094 2161 ntBASIC20.45■□□□□ 0.86
NGFP01138 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NGFP01138 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NGFP01138 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NGFP01138 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms