Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TGFAP01135 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.61■□□□□ 0.73
TGFAP01135 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
TGFAP01135 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.61■□□□□ 0.73
TGFAP01135 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TGFAP01135 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TGFAP01135 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TGFAP01135 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TGFAP01135 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TGFAP01135 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TGFAP01135 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.6■□□□□ 0.73
TGFAP01135 AC010997.5-201ENST00000609182 354 ntBASIC19.6■□□□□ 0.73
TGFAP01135 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TGFAP01135 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TGFAP01135 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TGFAP01135 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TGFAP01135 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TGFAP01135 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TGFAP01135 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TGFAP01135 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TGFAP01135 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.59■□□□□ 0.73
TGFAP01135 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TGFAP01135 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TGFAP01135 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TGFAP01135 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TGFAP01135 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TGFAP01135 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.58■□□□□ 0.72
TGFAP01135 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TGFAP01135 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.58■□□□□ 0.72
TGFAP01135 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.58■□□□□ 0.72
TGFAP01135 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.58■□□□□ 0.72
TGFAP01135 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.58■□□□□ 0.72
TGFAP01135 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.58■□□□□ 0.72
TGFAP01135 MTDHP2-201ENST00000601468 714 ntBASIC19.58■□□□□ 0.72
TGFAP01135 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TGFAP01135 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
TGFAP01135 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TGFAP01135 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TGFAP01135 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TGFAP01135 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TGFAP01135 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TGFAP01135 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.57■□□□□ 0.72
TGFAP01135 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.57■□□□□ 0.72
TGFAP01135 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TGFAP01135 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.57■□□□□ 0.72
TGFAP01135 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TGFAP01135 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.57■□□□□ 0.72
TGFAP01135 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TGFAP01135 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TGFAP01135 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TGFAP01135 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.56■□□□□ 0.72
TGFAP01135 AL136116.3-201ENST00000402907 1138 ntBASIC19.56■□□□□ 0.72
TGFAP01135 AC131281.2-201ENST00000520478 145 ntBASIC19.56■□□□□ 0.72
TGFAP01135 AL139246.5-201ENST00000606645 996 ntBASIC19.56■□□□□ 0.72
TGFAP01135 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TGFAP01135 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.56■□□□□ 0.72
TGFAP01135 MIR638-201ENST00000385237 100 ntBASIC19.55■□□□□ 0.72
TGFAP01135 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TGFAP01135 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TGFAP01135 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.55■□□□□ 0.72
TGFAP01135 AC011551.1-201ENST00000614101 683 ntBASIC19.55■□□□□ 0.72
TGFAP01135 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
TGFAP01135 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TGFAP01135 MIR6724-1-201ENST00000616420 92 ntBASIC19.54■□□□□ 0.72
TGFAP01135 MIR6724-2-201ENST00000616483 92 ntBASIC19.54■□□□□ 0.72
TGFAP01135 MIR6724-4-201ENST00000617390 92 ntBASIC19.54■□□□□ 0.72
TGFAP01135 MIR6724-3-201ENST00000622482 92 ntBASIC19.54■□□□□ 0.72
TGFAP01135 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TGFAP01135 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TGFAP01135 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.54■□□□□ 0.72
TGFAP01135 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TGFAP01135 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.54■□□□□ 0.72
TGFAP01135 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TGFAP01135 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.53■□□□□ 0.72
TGFAP01135 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TGFAP01135 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.53■□□□□ 0.72
TGFAP01135 AL356740.2-201ENST00000601559 647 ntBASIC19.53■□□□□ 0.72
TGFAP01135 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.53■□□□□ 0.72
TGFAP01135 AL117332.1-201ENST00000622628 974 ntBASIC19.53■□□□□ 0.72
TGFAP01135 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.53■□□□□ 0.72
TGFAP01135 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TGFAP01135 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TGFAP01135 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TGFAP01135 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TGFAP01135 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TGFAP01135 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TGFAP01135 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.52■□□□□ 0.72
TGFAP01135 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.52■□□□□ 0.72
TGFAP01135 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.52■□□□□ 0.72
TGFAP01135 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.52■□□□□ 0.72
TGFAP01135 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TGFAP01135 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TGFAP01135 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.51■□□□□ 0.71
TGFAP01135 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.51■□□□□ 0.71
TGFAP01135 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TGFAP01135 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TGFAP01135 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TGFAP01135 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TGFAP01135 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TGFAP01135 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms