Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPS2P7-201ENST00000447334 885 ntBASIC28.55■■■□□ 2.16
FOXN1O15353 PBX2P1-201ENST00000493219 1291 ntBASIC28.55■■■□□ 2.16
FOXN1O15353 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.55■■■□□ 2.16
FOXN1O15353 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
FOXN1O15353 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
FOXN1O15353 AP002414.2-202ENST00000590929 1450 ntBASIC28.54■■■□□ 2.16
FOXN1O15353 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
FOXN1O15353 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
FOXN1O15353 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.53■■■□□ 2.16
FOXN1O15353 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.53■■■□□ 2.16
FOXN1O15353 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.53■■■□□ 2.16
FOXN1O15353 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.53■■■□□ 2.16
FOXN1O15353 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
FOXN1O15353 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
FOXN1O15353 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
FOXN1O15353 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
FOXN1O15353 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.52■■■□□ 2.16
FOXN1O15353 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
FOXN1O15353 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
FOXN1O15353 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
FOXN1O15353 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
FOXN1O15353 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
FOXN1O15353 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
FOXN1O15353 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.16
FOXN1O15353 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
FOXN1O15353 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
FOXN1O15353 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.51■■■□□ 2.15
FOXN1O15353 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
FOXN1O15353 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
FOXN1O15353 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
FOXN1O15353 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
FOXN1O15353 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
FOXN1O15353 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
FOXN1O15353 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
FOXN1O15353 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
FOXN1O15353 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
FOXN1O15353 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
FOXN1O15353 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.49■■■□□ 2.15
FOXN1O15353 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
FOXN1O15353 AL356740.2-201ENST00000601559 647 ntBASIC28.49■■■□□ 2.15
FOXN1O15353 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
FOXN1O15353 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
FOXN1O15353 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
FOXN1O15353 KRT18P24-201ENST00000344739 1156 ntBASIC28.48■■■□□ 2.15
FOXN1O15353 SUDS3P1-201ENST00000505831 966 ntBASIC28.48■■■□□ 2.15
FOXN1O15353 AC090192.1-201ENST00000517740 490 ntBASIC28.48■■■□□ 2.15
FOXN1O15353 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
FOXN1O15353 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.47■■■□□ 2.15
FOXN1O15353 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
FOXN1O15353 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
FOXN1O15353 AL162430.1-201ENST00000480705 870 ntBASIC28.47■■■□□ 2.15
FOXN1O15353 AL031432.3-201ENST00000607698 485 ntBASIC28.47■■■□□ 2.15
FOXN1O15353 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
FOXN1O15353 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
FOXN1O15353 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.46■■■□□ 2.15
FOXN1O15353 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
FOXN1O15353 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.46■■■□□ 2.15
FOXN1O15353 MIR6724-1-201ENST00000616420 92 ntBASIC28.46■■■□□ 2.15
FOXN1O15353 MIR6724-2-201ENST00000616483 92 ntBASIC28.46■■■□□ 2.15
FOXN1O15353 MIR6724-4-201ENST00000617390 92 ntBASIC28.46■■■□□ 2.15
FOXN1O15353 MIR6821-201ENST00000617625 74 ntBASIC28.46■■■□□ 2.15
FOXN1O15353 MIR6724-3-201ENST00000622482 92 ntBASIC28.46■■■□□ 2.15
FOXN1O15353 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
FOXN1O15353 AC022616.5-201ENST00000518796 181 ntBASIC28.45■■■□□ 2.14
FOXN1O15353 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.45■■■□□ 2.14
FOXN1O15353 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
FOXN1O15353 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
FOXN1O15353 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
FOXN1O15353 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.44■■■□□ 2.14
FOXN1O15353 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
FOXN1O15353 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
FOXN1O15353 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
FOXN1O15353 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.44■■■□□ 2.14
FOXN1O15353 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.44■■■□□ 2.14
FOXN1O15353 AL512631.2-201ENST00000604634 923 ntBASIC28.44■■■□□ 2.14
FOXN1O15353 AC010997.5-201ENST00000609182 354 ntBASIC28.44■■■□□ 2.14
FOXN1O15353 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.44■■■□□ 2.14
FOXN1O15353 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
FOXN1O15353 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.43■■■□□ 2.14
FOXN1O15353 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.43■■■□□ 2.14
FOXN1O15353 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
FOXN1O15353 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXN1O15353 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.42■■■□□ 2.14
FOXN1O15353 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.42■■■□□ 2.14
FOXN1O15353 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXN1O15353 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
FOXN1O15353 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.41■■■□□ 2.14
FOXN1O15353 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
FOXN1O15353 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
FOXN1O15353 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
FOXN1O15353 RARRES2P11-201ENST00000635158 484 ntBASIC28.41■■■□□ 2.14
FOXN1O15353 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
FOXN1O15353 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
FOXN1O15353 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
FOXN1O15353 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
FOXN1O15353 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
FOXN1O15353 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
FOXN1O15353 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.4■■■□□ 2.14
FOXN1O15353 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
FOXN1O15353 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms