Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.18■□□□□ 0.98
CCL21O00585 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL21O00585 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.18■□□□□ 0.98
CCL21O00585 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.18■□□□□ 0.98
CCL21O00585 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.18■□□□□ 0.98
CCL21O00585 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CCL21O00585 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.17■□□□□ 0.98
CCL21O00585 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.17■□□□□ 0.98
CCL21O00585 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCL21O00585 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL21O00585 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.17■□□□□ 0.98
CCL21O00585 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL21O00585 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL21O00585 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL21O00585 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.16■□□□□ 0.98
CCL21O00585 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL21O00585 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.16■□□□□ 0.98
CCL21O00585 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.16■□□□□ 0.98
CCL21O00585 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL21O00585 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL21O00585 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCL21O00585 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.15■□□□□ 0.98
CCL21O00585 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.15■□□□□ 0.98
CCL21O00585 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.15■□□□□ 0.98
CCL21O00585 AC011551.1-201ENST00000614101 683 ntBASIC21.15■□□□□ 0.98
CCL21O00585 AC110285.6-201ENST00000617652 491 ntBASIC21.15■□□□□ 0.98
CCL21O00585 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL21O00585 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL21O00585 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL21O00585 AC096631.2-201ENST00000436136 790 ntBASIC21.14■□□□□ 0.97
CCL21O00585 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL21O00585 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCL21O00585 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.14■□□□□ 0.97
CCL21O00585 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.14■□□□□ 0.97
CCL21O00585 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCL21O00585 AC139426.1-201ENST00000568218 2529 ntBASIC21.14■□□□□ 0.97
CCL21O00585 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL21O00585 AP004609.3-201ENST00000610705 1884 ntBASIC21.13■□□□□ 0.97
CCL21O00585 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.13■□□□□ 0.97
CCL21O00585 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL21O00585 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL21O00585 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL21O00585 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL21O00585 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL21O00585 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.13■□□□□ 0.97
CCL21O00585 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL21O00585 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL21O00585 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL21O00585 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.12■□□□□ 0.97
CCL21O00585 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCL21O00585 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.12■□□□□ 0.97
CCL21O00585 AC005837.3-201ENST00000612163 286 ntBASIC21.12■□□□□ 0.97
CCL21O00585 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCL21O00585 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
CCL21O00585 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.11■□□□□ 0.97
CCL21O00585 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCL21O00585 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.11■□□□□ 0.97
CCL21O00585 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCL21O00585 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCL21O00585 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.11■□□□□ 0.97
CCL21O00585 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCL21O00585 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCL21O00585 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL21O00585 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL21O00585 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.1■□□□□ 0.97
CCL21O00585 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCL21O00585 MIR4466-201ENST00000606121 54 ntBASIC21.1■□□□□ 0.97
CCL21O00585 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL21O00585 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL21O00585 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL21O00585 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL21O00585 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL21O00585 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL21O00585 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL21O00585 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.09■□□□□ 0.97
CCL21O00585 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL21O00585 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCL21O00585 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL21O00585 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.08■□□□□ 0.97
CCL21O00585 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL21O00585 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.08■□□□□ 0.97
CCL21O00585 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.08■□□□□ 0.97
CCL21O00585 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.08■□□□□ 0.97
CCL21O00585 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.07■□□□□ 0.96
CCL21O00585 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL21O00585 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.07■□□□□ 0.96
CCL21O00585 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL21O00585 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCL21O00585 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL21O00585 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.07■□□□□ 0.96
CCL21O00585 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL21O00585 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL21O00585 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.06■□□□□ 0.96
CCL21O00585 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL21O00585 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL21O00585 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL21O00585 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL21O00585 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.05■□□□□ 0.96
CCL21O00585 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL21O00585 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms