Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTCAO00442 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
RTCAO00442 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.64■■□□□ 1.21
RTCAO00442 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
RTCAO00442 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCAO00442 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCAO00442 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RTCAO00442 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.63■■□□□ 1.21
RTCAO00442 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCAO00442 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCAO00442 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCAO00442 AC022211.4-201ENST00000625094 2161 ntBASIC22.63■■□□□ 1.21
RTCAO00442 SLC6A10P-202ENST00000431994 2058 ntBASIC22.62■■□□□ 1.21
RTCAO00442 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCAO00442 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.62■■□□□ 1.21
RTCAO00442 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.62■■□□□ 1.21
RTCAO00442 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTCAO00442 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCAO00442 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCAO00442 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCAO00442 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.61■■□□□ 1.21
RTCAO00442 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTCAO00442 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCAO00442 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCAO00442 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RTCAO00442 MIR6765-201ENST00000614092 87 ntBASIC22.61■■□□□ 1.21
RTCAO00442 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCAO00442 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.6■■□□□ 1.21
RTCAO00442 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.6■■□□□ 1.21
RTCAO00442 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RTCAO00442 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RTCAO00442 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCAO00442 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCAO00442 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCAO00442 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCAO00442 DUX4L18-201ENST00000553347 1267 ntBASIC22.59■■□□□ 1.21
RTCAO00442 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.59■■□□□ 1.21
RTCAO00442 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCAO00442 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCAO00442 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCAO00442 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
RTCAO00442 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
RTCAO00442 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCAO00442 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCAO00442 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCAO00442 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCAO00442 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RTCAO00442 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.58■■□□□ 1.21
RTCAO00442 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTCAO00442 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RTCAO00442 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.57■■□□□ 1.2
RTCAO00442 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RTCAO00442 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.57■■□□□ 1.2
RTCAO00442 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCAO00442 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCAO00442 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTCAO00442 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCAO00442 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RTCAO00442 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 RPS2P7-201ENST00000447334 885 ntBASIC22.56■■□□□ 1.2
RTCAO00442 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RTCAO00442 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCAO00442 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCAO00442 AC138932.3-201ENST00000567634 1902 ntBASIC22.55■■□□□ 1.2
RTCAO00442 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.55■■□□□ 1.2
RTCAO00442 KRT18P10-201ENST00000388836 1287 ntBASIC22.55■■□□□ 1.2
RTCAO00442 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTCAO00442 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.55■■□□□ 1.2
RTCAO00442 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.55■■□□□ 1.2
RTCAO00442 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTCAO00442 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RTCAO00442 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.54■■□□□ 1.2
RTCAO00442 AC004987.1-201ENST00000428627 508 ntBASIC22.54■■□□□ 1.2
RTCAO00442 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTCAO00442 AC142381.3-201ENST00000568208 1670 ntBASIC22.54■■□□□ 1.2
RTCAO00442 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTCAO00442 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RTCAO00442 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCAO00442 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCAO00442 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.53■■□□□ 1.2
RTCAO00442 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCAO00442 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RTCAO00442 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCAO00442 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RTCAO00442 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RTCAO00442 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms