Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.65■■□□□ 1.38
H3BM21 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.65■■□□□ 1.38
H3BM21 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.65■■□□□ 1.38
H3BM21 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
H3BM21 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
H3BM21 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.65■■□□□ 1.38
H3BM21 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
H3BM21 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
H3BM21 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H3BM21 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
H3BM21 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
H3BM21 AC091060.1-201ENST00000623524 1766 ntBASIC23.64■■□□□ 1.37
H3BM21 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
H3BM21 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.64■■□□□ 1.37
H3BM21 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
H3BM21 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.63■■□□□ 1.37
H3BM21 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
H3BM21 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.63■■□□□ 1.37
H3BM21 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.63■■□□□ 1.37
H3BM21 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 ERN1-208ENST00000606895 2068 ntBASIC23.61■■□□□ 1.37
H3BM21 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H3BM21 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 Z92544.1-202ENST00000571933 1220 ntBASIC23.6■■□□□ 1.37
H3BM21 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
H3BM21 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.59■■□□□ 1.37
H3BM21 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
H3BM21 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
H3BM21 AC145676.1-201ENST00000514988 2004 ntBASIC23.59■■□□□ 1.37
H3BM21 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.59■■□□□ 1.37
H3BM21 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
H3BM21 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
H3BM21 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.58■■□□□ 1.37
H3BM21 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
H3BM21 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.58■■□□□ 1.37
H3BM21 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
H3BM21 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.57■■□□□ 1.36
H3BM21 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
H3BM21 AC239859.2-201ENST00000444165 318 ntBASIC23.57■■□□□ 1.36
H3BM21 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.57■■□□□ 1.36
H3BM21 AC131212.1-201ENST00000613771 668 ntBASIC23.57■■□□□ 1.36
H3BM21 AC010501.1-201ENST00000606270 1962 ntBASIC23.57■■□□□ 1.36
H3BM21 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
H3BM21 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.56■■□□□ 1.36
H3BM21 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.56■■□□□ 1.36
H3BM21 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.56■■□□□ 1.36
H3BM21 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H3BM21 DUSP8P4-201ENST00000399538 1761 ntBASIC23.55■■□□□ 1.36
H3BM21 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.55■■□□□ 1.36
H3BM21 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
H3BM21 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
H3BM21 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
H3BM21 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.54■■□□□ 1.36
H3BM21 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 BX664725.1-201ENST00000438252 379 ntBASIC23.54■■□□□ 1.36
H3BM21 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
H3BM21 KRT125P-201ENST00000546827 989 ntBASIC23.54■■□□□ 1.36
H3BM21 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
H3BM21 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H3BM21 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H3BM21 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.53■■□□□ 1.36
H3BM21 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.53■■□□□ 1.36
H3BM21 THA1P-201ENST00000590384 1145 ntBASIC23.53■■□□□ 1.36
H3BM21 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H3BM21 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.53■■□□□ 1.36
H3BM21 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
H3BM21 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
H3BM21 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
H3BM21 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
H3BM21 KRT18P24-201ENST00000344739 1156 ntBASIC23.52■■□□□ 1.36
H3BM21 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.52■■□□□ 1.36
H3BM21 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
H3BM21 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
H3BM21 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
H3BM21 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms