Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 LINC00543-201ENST00000567234 1845 ntBASIC20.39■□□□□ 0.86
RFPL4AA6NLU0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL4AA6NLU0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.39■□□□□ 0.85
RFPL4AA6NLU0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.39■□□□□ 0.85
RFPL4AA6NLU0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RFPL4AA6NLU0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL4AA6NLU0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFPL4AA6NLU0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFPL4AA6NLU0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.37■□□□□ 0.85
RFPL4AA6NLU0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 MIR3960-201ENST00000583311 91 ntBASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RFPL4AA6NLU0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFPL4AA6NLU0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFPL4AA6NLU0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.33■□□□□ 0.85
RFPL4AA6NLU0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RFPL4AA6NLU0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFPL4AA6NLU0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFPL4AA6NLU0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFPL4AA6NLU0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFPL4AA6NLU0 AC079834.2-201ENST00000609776 1949 ntBASIC20.33■□□□□ 0.84
RFPL4AA6NLU0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL4AA6NLU0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.32■□□□□ 0.84
RFPL4AA6NLU0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.32■□□□□ 0.84
RFPL4AA6NLU0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFPL4AA6NLU0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 AC068473.5-201ENST00000616428 2072 ntBASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFPL4AA6NLU0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RFPL4AA6NLU0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.3■□□□□ 0.84
RFPL4AA6NLU0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL4AA6NLU0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFPL4AA6NLU0 AC010501.1-201ENST00000606270 1962 ntBASIC20.3■□□□□ 0.84
RFPL4AA6NLU0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.3■□□□□ 0.84
RFPL4AA6NLU0 RNF126P1-201ENST00000567452 1320 ntBASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 RP9P-202ENST00000450133 1212 ntBASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.29■□□□□ 0.84
RFPL4AA6NLU0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.28■□□□□ 0.84
RFPL4AA6NLU0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.28■□□□□ 0.84
RFPL4AA6NLU0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.28■□□□□ 0.84
RFPL4AA6NLU0 AC007029.1-201ENST00000604183 313 ntBASIC20.28■□□□□ 0.84
RFPL4AA6NLU0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFPL4AA6NLU0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 AC138932.3-201ENST00000567634 1902 ntBASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFPL4AA6NLU0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms