Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV39A0A0B4J263 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV39A0A0B4J263 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV39A0A0B4J263 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV39A0A0B4J263 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.78■□□□□ 0.76
TRAV39A0A0B4J263 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV39A0A0B4J263 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV39A0A0B4J263 AL139125.2-201ENST00000623134 1869 ntBASIC19.77■□□□□ 0.76
TRAV39A0A0B4J263 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV39A0A0B4J263 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV39A0A0B4J263 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV39A0A0B4J263 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV39A0A0B4J263 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRAV39A0A0B4J263 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 AC026202.3-201ENST00000600805 1127 ntBASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV39A0A0B4J263 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 RAP2CP1-202ENST00000605179 643 ntBASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV39A0A0B4J263 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV39A0A0B4J263 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRAV39A0A0B4J263 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV39A0A0B4J263 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV39A0A0B4J263 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV39A0A0B4J263 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TRAV39A0A0B4J263 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 AC009831.1-201ENST00000580420 1582 ntBASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV39A0A0B4J263 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 AC133552.2-201ENST00000619106 1032 ntBASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 RNF126P1-201ENST00000567452 1320 ntBASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV39A0A0B4J263 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV39A0A0B4J263 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms