Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 AC137630.3-201ENST00000607245 391 ntBASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
TRAV19A0A0A6YYK7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRAV19A0A0A6YYK7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TRAV19A0A0A6YYK7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.7■■□□□ 1.54
TRAV19A0A0A6YYK7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRAV19A0A0A6YYK7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.7■■□□□ 1.54
TRAV19A0A0A6YYK7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRAV19A0A0A6YYK7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
TRAV19A0A0A6YYK7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRAV19A0A0A6YYK7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRAV19A0A0A6YYK7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRAV19A0A0A6YYK7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.69■■□□□ 1.54
TRAV19A0A0A6YYK7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.69■■□□□ 1.54
TRAV19A0A0A6YYK7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TRAV19A0A0A6YYK7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRAV19A0A0A6YYK7 MIR4281-201ENST00000580852 62 ntBASIC24.68■■□□□ 1.54
TRAV19A0A0A6YYK7 AC011551.1-201ENST00000614101 683 ntBASIC24.68■■□□□ 1.54
TRAV19A0A0A6YYK7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TRAV19A0A0A6YYK7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.68■■□□□ 1.54
TRAV19A0A0A6YYK7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.67■■□□□ 1.54
TRAV19A0A0A6YYK7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 AC021242.3-201ENST00000607598 1377 ntBASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRAV19A0A0A6YYK7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.65■■□□□ 1.54
TRAV19A0A0A6YYK7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRAV19A0A0A6YYK7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.64■■□□□ 1.54
TRAV19A0A0A6YYK7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRAV19A0A0A6YYK7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
TRAV19A0A0A6YYK7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.64■■□□□ 1.54
TRAV19A0A0A6YYK7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.64■■□□□ 1.54
TRAV19A0A0A6YYK7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRAV19A0A0A6YYK7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.63■■□□□ 1.53
TRAV19A0A0A6YYK7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.63■■□□□ 1.53
TRAV19A0A0A6YYK7 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.63■■□□□ 1.53
TRAV19A0A0A6YYK7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.63■■□□□ 1.53
TRAV19A0A0A6YYK7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 UNC93B8-201ENST00000511903 705 ntBASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRAV19A0A0A6YYK7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 KRT16P3-201ENST00000439127 1283 ntBASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 FOXO3B-201ENST00000395675 1928 ntBASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.61■■□□□ 1.53
TRAV19A0A0A6YYK7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TRAV19A0A0A6YYK7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRAV19A0A0A6YYK7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRAV19A0A0A6YYK7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.6■■□□□ 1.53
TRAV19A0A0A6YYK7 TSPY9P-201ENST00000440215 945 ntBASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms