Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 KRT18P34-201ENST00000488218 1270 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AL096865.1-201ENST00000606796 927 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AC084121.4-201ENST00000641598 221 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AF228730.8-201ENST00000642140 221 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 NKILA-202ENST00000614771 2598 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AC011676.5-201ENST00000624864 2660 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 KLF2P3-201ENST00000451977 1087 ntBASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 AC125807.1-201ENST00000483097 614 ntBASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 AP000842.3-202ENST00000569238 1080 ntBASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TSSC4Q9Y5U2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms