Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AL138918.1-201ENST00000568306 659 ntBASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 MIR4745-201ENST00000577608 62 ntBASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AC073439.1-201ENST00000624121 1774 ntBASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAI2Q9Y5P3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 SPCS2P4-201ENST00000436160 681 ntBASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 PRYP6-201ENST00000514804 343 ntBASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 AL513210.1-201ENST00000629608 234 ntBASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAI2Q9Y5P3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AC005622.1-201ENST00000636801 1703 ntBASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 POU5F1P6-201ENST00000466990 990 ntBASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms