Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AL138966.2-201ENST00000621997 464 ntBASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AC141257.4-201ENST00000634557 245 ntBASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AC136944.6-201ENST00000634818 245 ntBASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 AC041040.2-201ENST00000622926 2899 ntBASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 AL031432.5-201ENST00000641059 760 ntBASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 AC005252.3-201ENST00000623855 2258 ntBASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRCH1Q9Y2L9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
LRCH1Q9Y2L9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 AL365209.1-201ENST00000624418 6473 ntBASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms