Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC22.32■■□□□ 1.16
NINLQ9Y2I6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC22.32■■□□□ 1.16
NINLQ9Y2I6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NINLQ9Y2I6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 CYP4F24P-201ENST00000586049 1580 ntBASIC22.31■■□□□ 1.16
NINLQ9Y2I6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NINLQ9Y2I6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 AL033527.5-202ENST00000641632 1098 ntBASIC22.3■■□□□ 1.16
NINLQ9Y2I6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
NINLQ9Y2I6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 PIN1P1-201ENST00000412108 996 ntBASIC22.29■■□□□ 1.16
NINLQ9Y2I6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 AC114501.2-201ENST00000439631 535 ntBASIC22.29■■□□□ 1.16
NINLQ9Y2I6 GPR53P-205ENST00000457298 1084 ntBASIC22.29■■□□□ 1.16
NINLQ9Y2I6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NINLQ9Y2I6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NINLQ9Y2I6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NINLQ9Y2I6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms