Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 REXO1L8P-201ENST00000604378 1897 ntBASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 AC074044.1-201ENST00000609673 707 ntBASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 MEP1AP4-201ENST00000423244 1087 ntBASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 AC025048.3-201ENST00000590609 569 ntBASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 AC012645.4-201ENST00000610691 1061 ntBASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 AC005702.4-201ENST00000618393 416 ntBASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 AP001282.1-201ENST00000531301 1499 ntBASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPO2Q9UMS6 Z97205.2-201ENST00000564697 1639 ntBASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 DOC2GP-202ENST00000514950 1163 ntBASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 CR383656.12-201ENST00000549567 513 ntBASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 AC104794.3-201ENST00000566840 1248 ntBASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 AC099568.2-201ENST00000609194 695 ntBASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 AC025048.6-201ENST00000634326 1161 ntBASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 UBALD1-205ENST00000590891 2641 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms