Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 PCDHB19P-201ENST00000570871 2371 ntBASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 FAM220BP-201ENST00000377689 816 ntBASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 MIR943-201ENST00000401286 94 ntBASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 AC107890.1-201ENST00000422478 521 ntBASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 AC098859.1-201ENST00000502915 1238 ntBASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 AC140878.1-201ENST00000565277 250 ntBASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 HLA-H-201ENST00000383620 1096 ntBASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 AC055876.3-201ENST00000431496 288 ntBASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 SPCS2P1-201ENST00000561636 679 ntBASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 AC138649.4-201ENST00000612222 287 ntBASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 GGT3P-204ENST00000453783 1664 ntBASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20BQ9P0W2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 FO538757.1-201ENST00000623083 1397 ntBASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 TREML5P-201ENST00000421694 576 ntBASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
HMG20BQ9P0W2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.95■□□□□ 0.79
HMG20BQ9P0W2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20BQ9P0W2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.95■□□□□ 0.78
HMG20BQ9P0W2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMG20BQ9P0W2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20BQ9P0W2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20BQ9P0W2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.95■□□□□ 0.78
HMG20BQ9P0W2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms