Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 GGT4P-201ENST00000623672 1708 ntBASIC16.7■□□□□ 0.26
HACD3Q9P035 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.7■□□□□ 0.26
HACD3Q9P035 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HACD3Q9P035 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.69■□□□□ 0.26
HACD3Q9P035 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.69■□□□□ 0.26
HACD3Q9P035 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.69■□□□□ 0.26
HACD3Q9P035 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 AC006449.5-201ENST00000610658 2098 ntBASIC16.69■□□□□ 0.26
HACD3Q9P035 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HACD3Q9P035 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HACD3Q9P035 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HACD3Q9P035 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HACD3Q9P035 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.68■□□□□ 0.26
HACD3Q9P035 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.68■□□□□ 0.26
HACD3Q9P035 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.68■□□□□ 0.26
HACD3Q9P035 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.68■□□□□ 0.26
HACD3Q9P035 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.68■□□□□ 0.26
HACD3Q9P035 MIR940-201ENST00000401276 94 ntBASIC16.68■□□□□ 0.26
HACD3Q9P035 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HACD3Q9P035 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.68■□□□□ 0.26
HACD3Q9P035 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.68■□□□□ 0.26
HACD3Q9P035 AC002347.1-201ENST00000569543 541 ntBASIC16.68■□□□□ 0.26
HACD3Q9P035 AL513190.1-201ENST00000621254 727 ntBASIC16.68■□□□□ 0.26
HACD3Q9P035 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.68■□□□□ 0.26
HACD3Q9P035 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HACD3Q9P035 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HACD3Q9P035 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HACD3Q9P035 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HACD3Q9P035 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HACD3Q9P035 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 AC002056.1-201ENST00000395613 760 ntBASIC16.67■□□□□ 0.26
HACD3Q9P035 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.67■□□□□ 0.26
HACD3Q9P035 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms