Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 TSEN15P1-201ENST00000423257 515 ntBASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 PAWRP1-201ENST00000451083 565 ntBASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKIPSDQ9NZQ3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 AC008741.2-201ENST00000612792 3115 ntBASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 MIR3197-201ENST00000582241 73 ntBASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 AC092902.6-201ENST00000641783 218 ntBASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 AL645728.2-201ENST00000641974 660 ntBASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKIPSDQ9NZQ3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms