Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 BOLA2P3-201ENST00000404566 256 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AL139010.1-201ENST00000454878 894 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 CROCCP4-201ENST00000457096 498 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AC092337.1-201ENST00000568699 1129 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AC020765.3-201ENST00000613051 740 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 MIR8072-201ENST00000614241 80 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 AC067852.2-201ENST00000590513 2313 ntBASIC17.86■□□□□ 0.45
HIPK3Q9H422 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.86■□□□□ 0.45
HIPK3Q9H422 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIPK3Q9H422 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 AC104989.1-201ENST00000519711 778 ntBASIC17.85■□□□□ 0.45
HIPK3Q9H422 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 FAM8A2P-201ENST00000528813 1142 ntBASIC17.85■□□□□ 0.45
HIPK3Q9H422 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 TIMM17BP1-201ENST00000545713 516 ntBASIC17.85■□□□□ 0.45
HIPK3Q9H422 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HIPK3Q9H422 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HIPK3Q9H422 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms