Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 FAM220BP-201ENST00000377689 816 ntBASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AC114501.2-201ENST00000439631 535 ntBASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 BANF1P1-201ENST00000553684 263 ntBASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AL512361.1-201ENST00000554200 418 ntBASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2OQ9C0C9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2OQ9C0C9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 TUBB1P2-201ENST00000422712 1306 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 TUBB1P1-201ENST00000503144 1300 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms