Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CLK3P2-201ENST00000427566 1453 ntBASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 AC010319.3-201ENST00000597028 470 ntBASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 FAM86MP-201ENST00000340703 885 ntBASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 AC104989.1-201ENST00000519711 778 ntBASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 MIR4321-201ENST00000592276 80 ntBASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RTFDC1Q9BY42 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AP001094.4-201ENST00000579008 2176 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 BNIP3P42-201ENST00000454982 569 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AC104596.2-201ENST00000512793 793 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 MIR4525-201ENST00000580000 75 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 BNIP3P29-201ENST00000598302 571 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AC011447.5-201ENST00000616168 564 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 AL603756.1-201ENST00000606511 2163 ntBASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms