Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS2Q99743 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
NPAS2Q99743 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS2Q99743 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 AL020989.1-201ENST00000422979 469 ntBASIC16.18■□□□□ 0.18
NPAS2Q99743 KRT18P27-201ENST00000427733 1299 ntBASIC16.18■□□□□ 0.18
NPAS2Q99743 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NPAS2Q99743 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.18■□□□□ 0.18
NPAS2Q99743 AC145285.3-201ENST00000564603 959 ntBASIC16.18■□□□□ 0.18
NPAS2Q99743 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.18■□□□□ 0.18
NPAS2Q99743 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS2Q99743 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS2Q99743 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS2Q99743 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS2Q99743 AL021920.2-201ENST00000624828 1351 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS2Q99743 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 AC073621.1-201ENST00000392730 636 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS2Q99743 PMS2P1-201ENST00000431037 1228 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.17■□□□□ 0.18
NPAS2Q99743 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NPAS2Q99743 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.17■□□□□ 0.18
NPAS2Q99743 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS2Q99743 RNA5SP415-201ENST00000517246 115 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NPAS2Q99743 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS2Q99743 AC023511.2-201ENST00000618803 211 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 AC117500.6-201ENST00000624871 588 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 AC104109.2-201ENST00000602919 1418 ntBASIC16.17■□□□□ 0.18
NPAS2Q99743 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS2Q99743 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NPAS2Q99743 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS2Q99743 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS2Q99743 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms