Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.65□□□□□ -0.22
S1PR3Q99500 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
S1PR3Q99500 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
S1PR3Q99500 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
S1PR3Q99500 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
S1PR3Q99500 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.64□□□□□ -0.23
S1PR3Q99500 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.64□□□□□ -0.23
S1PR3Q99500 AC079776.4-201ENST00000511039 504 ntBASIC13.64□□□□□ -0.23
S1PR3Q99500 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.64□□□□□ -0.23
S1PR3Q99500 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
S1PR3Q99500 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.64□□□□□ -0.23
S1PR3Q99500 AC116407.3-201ENST00000623905 1129 ntBASIC13.64□□□□□ -0.23
S1PR3Q99500 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.64□□□□□ -0.23
S1PR3Q99500 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.64□□□□□ -0.23
S1PR3Q99500 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
S1PR3Q99500 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
S1PR3Q99500 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
S1PR3Q99500 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
S1PR3Q99500 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
S1PR3Q99500 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
S1PR3Q99500 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.63□□□□□ -0.23
S1PR3Q99500 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.63□□□□□ -0.23
S1PR3Q99500 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
S1PR3Q99500 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
S1PR3Q99500 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
S1PR3Q99500 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.63□□□□□ -0.23
S1PR3Q99500 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
S1PR3Q99500 PMS2P1-201ENST00000431037 1228 ntBASIC13.63□□□□□ -0.23
S1PR3Q99500 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.63□□□□□ -0.23
S1PR3Q99500 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.63□□□□□ -0.23
S1PR3Q99500 AC107918.2-201ENST00000530817 355 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms