Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 AC148477.5-201ENST00000625164 1645 ntBASIC13.42□□□□□ -0.26
RAB40CQ96S21 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.41□□□□□ -0.26
RAB40CQ96S21 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AC083849.1-201ENST00000615227 514 ntBASIC13.41□□□□□ -0.26
RAB40CQ96S21 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AC069224.1-201ENST00000566372 1715 ntBASIC13.41□□□□□ -0.26
RAB40CQ96S21 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 AL365209.1-201ENST00000624418 6473 ntBASIC13.41□□□□□ -0.26
RAB40CQ96S21 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB40CQ96S21 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB40CQ96S21 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 AC023157.3-201ENST00000619086 2088 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 PRAL-201ENST00000624952 3286 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 SPDYE21P-201ENST00000413323 827 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 AL645929.1-201ENST00000420084 975 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 TP73-AS1-210ENST00000637775 1455 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB40CQ96S21 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB40CQ96S21 GPAA1P2-202ENST00000606848 1787 ntBASIC13.4□□□□□ -0.26
RAB40CQ96S21 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RAB40CQ96S21 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB40CQ96S21 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.39□□□□□ -0.27
RAB40CQ96S21 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms