Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC005730.2-201ENST00000564549 1184 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 MEG3_2.1-201ENST00000611456 105 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC093462.1-201ENST00000621167 1683 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TARDBPP1-201ENST00000442013 1203 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 NDUFS6P1-201ENST00000485187 316 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 ABCC6P2-201ENST00000526069 590 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC244157.2-201ENST00000616239 1006 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 HNRNPA1P63-201ENST00000427917 963 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TPT1P11-201ENST00000458482 498 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 LINC00431-202ENST00000636375 159 ntBASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC4.87□□□□□ -1.63
HMCN1Q96RW7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMCN1Q96RW7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms