Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.62■□□□□ 0.09
COL21A1Q96P44 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL21A1Q96P44 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 AL365203.3-201ENST00000609742 2057 ntBASIC15.61■□□□□ 0.09
COL21A1Q96P44 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 OR7E47P-204ENST00000575924 449 ntBASIC15.61■□□□□ 0.09
COL21A1Q96P44 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 REXO1L3P-201ENST00000622202 1288 ntBASIC15.61■□□□□ 0.09
COL21A1Q96P44 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL21A1Q96P44 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.61■□□□□ 0.09
COL21A1Q96P44 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 PAUPAR-201ENST00000630360 2965 ntBASIC15.6■□□□□ 0.09
COL21A1Q96P44 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AC107918.2-201ENST00000530817 355 ntBASIC15.6■□□□□ 0.09
COL21A1Q96P44 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AC024909.3-201ENST00000611513 2257 ntBASIC15.6■□□□□ 0.09
COL21A1Q96P44 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms