Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 AL603832.2-201ENST00000566195 2125 ntBASIC19.12■□□□□ 0.65
PGBD1Q96JS3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.12■□□□□ 0.65
PGBD1Q96JS3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 GPALPP1-207ENST00000611650 899 ntBASIC19.12■□□□□ 0.65
PGBD1Q96JS3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PGBD1Q96JS3 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.12■□□□□ 0.65
PGBD1Q96JS3 ELL2P1-201ENST00000413990 1906 ntBASIC19.12■□□□□ 0.65
PGBD1Q96JS3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 YBX1P5-201ENST00000509441 847 ntBASIC19.11■□□□□ 0.65
PGBD1Q96JS3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 AL009183.1-201ENST00000603760 355 ntBASIC19.11■□□□□ 0.65
PGBD1Q96JS3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD1Q96JS3 AC010491.1-201ENST00000563101 2797 ntBASIC19.1■□□□□ 0.65
PGBD1Q96JS3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AC211486.1-202ENST00000416371 468 ntBASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AC211476.1-201ENST00000503899 468 ntBASIC19.1■□□□□ 0.65
PGBD1Q96JS3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.1■□□□□ 0.65
PGBD1Q96JS3 AP001350.2-201ENST00000625104 1094 ntBASIC19.1■□□□□ 0.65
PGBD1Q96JS3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PGBD1Q96JS3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms