Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX21Q969T3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX21Q969T3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX21Q969T3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.5■□□□□ 0.71
SNX21Q969T3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.5■□□□□ 0.71
SNX21Q969T3 FGFR3P6-201ENST00000457012 610 ntBASIC19.5■□□□□ 0.71
SNX21Q969T3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.5■□□□□ 0.71
SNX21Q969T3 AC069148.1-201ENST00000608741 768 ntBASIC19.5■□□□□ 0.71
SNX21Q969T3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.5■□□□□ 0.71
SNX21Q969T3 LINC02228-204ENST00000642115 2962 ntBASIC19.5■□□□□ 0.71
SNX21Q969T3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX21Q969T3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX21Q969T3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNX21Q969T3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SNX21Q969T3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX21Q969T3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX21Q969T3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX21Q969T3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX21Q969T3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX21Q969T3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX21Q969T3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX21Q969T3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SNX21Q969T3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.49■□□□□ 0.71
SNX21Q969T3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.49■□□□□ 0.71
SNX21Q969T3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX21Q969T3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.49■□□□□ 0.71
SNX21Q969T3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.49■□□□□ 0.71
SNX21Q969T3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.49■□□□□ 0.71
SNX21Q969T3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX21Q969T3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SNX21Q969T3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SNX21Q969T3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX21Q969T3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX21Q969T3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNX21Q969T3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX21Q969T3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SNX21Q969T3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.48■□□□□ 0.71
SNX21Q969T3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX21Q969T3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.48■□□□□ 0.71
SNX21Q969T3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms