Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 SPDYE10P-202ENST00000612005 668 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 SPDYE8P-202ENST00000612377 668 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RNF34Q969K3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF34Q969K3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF34Q969K3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF34Q969K3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF34Q969K3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.24■□□□□ 0.35
RNF34Q969K3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 TFAMP1-201ENST00000412727 736 ntBASIC17.24■□□□□ 0.35
RNF34Q969K3 RPS8P6-201ENST00000426177 609 ntBASIC17.24■□□□□ 0.35
RNF34Q969K3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF34Q969K3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.24■□□□□ 0.35
RNF34Q969K3 AC020765.3-201ENST00000613051 740 ntBASIC17.24■□□□□ 0.35
RNF34Q969K3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF34Q969K3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF34Q969K3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF34Q969K3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 AC063926.3-201ENST00000624734 5658 ntBASIC17.24■□□□□ 0.35
RNF34Q969K3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF34Q969K3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF34Q969K3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF34Q969K3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF34Q969K3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF34Q969K3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF34Q969K3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF34Q969K3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF34Q969K3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF34Q969K3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF34Q969K3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF34Q969K3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF34Q969K3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF34Q969K3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF34Q969K3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF34Q969K3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF34Q969K3 AL135744.1-201ENST00000565098 629 ntBASIC17.23■□□□□ 0.35
RNF34Q969K3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF34Q969K3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF34Q969K3 AC026120.1-201ENST00000611536 926 ntBASIC17.23■□□□□ 0.35
RNF34Q969K3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 AL691403.2-201ENST00000618460 490 ntBASIC17.23■□□□□ 0.35
RNF34Q969K3 GGT4P-201ENST00000623672 1708 ntBASIC17.23■□□□□ 0.35
RNF34Q969K3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF34Q969K3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF34Q969K3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF34Q969K3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF34Q969K3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.22■□□□□ 0.35
RNF34Q969K3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.22■□□□□ 0.35
RNF34Q969K3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF34Q969K3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF34Q969K3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF34Q969K3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF34Q969K3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF34Q969K3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF34Q969K3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF34Q969K3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF34Q969K3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF34Q969K3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF34Q969K3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF34Q969K3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF34Q969K3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms