Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 TERC-201ENST00000602385 541 ntBASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L1Q8WWY6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 HBZP1-201ENST00000354915 429 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 MIR4492-201ENST00000581627 80 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 AC073592.5-201ENST00000624854 528 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 AC141257.4-201ENST00000634557 245 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 AC136944.6-201ENST00000634818 245 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 TOP3BP1-201ENST00000420768 1380 ntBASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MBD3L1Q8WWY6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 AL390755.1-201ENST00000623716 2027 ntBASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MBD3L1Q8WWY6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms