Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 KRT8P39-201ENST00000396270 1433 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 SPDYE13P-201ENST00000445314 798 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 AC011467.2-201ENST00000598425 242 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 TERC-201ENST00000602385 541 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 AC023908.3-201ENST00000564211 3047 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNIH3Q8TBE1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CNIH3Q8TBE1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CNIH3Q8TBE1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 LINC00982-205ENST00000420957 435 ntBASIC15.08■□□□□ 0
CNIH3Q8TBE1 AL020989.1-201ENST00000422979 469 ntBASIC15.08■□□□□ 0
CNIH3Q8TBE1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 AC133561.5-201ENST00000635547 218 ntBASIC15.08■□□□□ 0
CNIH3Q8TBE1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 LINC01144-201ENST00000626198 1710 ntBASIC15.08■□□□□ 0
CNIH3Q8TBE1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 GPAA1P2-202ENST00000606848 1787 ntBASIC15.08■□□□□ 0
CNIH3Q8TBE1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.08■□□□□ 0
CNIH3Q8TBE1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH3Q8TBE1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.08■□□□□ 0
CNIH3Q8TBE1 CICP13-201ENST00000422015 2789 ntBASIC15.07■□□□□ 0
CNIH3Q8TBE1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH3Q8TBE1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms