Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.57■□□□□ 0.4
LMO3Q8TAP4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 SPCS2P4-201ENST00000436160 681 ntBASIC17.56■□□□□ 0.4
LMO3Q8TAP4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 FAM86C2P-203ENST00000528684 1004 ntBASIC17.56■□□□□ 0.4
LMO3Q8TAP4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 MIR4321-201ENST00000592276 80 ntBASIC17.56■□□□□ 0.4
LMO3Q8TAP4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO3Q8TAP4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 HTR5BP-201ENST00000430851 1154 ntBASIC17.55■□□□□ 0.4
LMO3Q8TAP4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AC098859.1-201ENST00000502915 1238 ntBASIC17.55■□□□□ 0.4
LMO3Q8TAP4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AC105233.2-201ENST00000523697 349 ntBASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AF228730.5-201ENST00000530288 346 ntBASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AL365330.1-201ENST00000607459 531 ntBASIC17.55■□□□□ 0.4
LMO3Q8TAP4 AC026120.1-201ENST00000611536 926 ntBASIC17.55■□□□□ 0.4
LMO3Q8TAP4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.55■□□□□ 0.4
LMO3Q8TAP4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 ACTG1P14-201ENST00000446382 1122 ntBASIC17.54■□□□□ 0.4
LMO3Q8TAP4 AC245100.5-201ENST00000452108 331 ntBASIC17.54■□□□□ 0.4
LMO3Q8TAP4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms