Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDND2Q8NHS1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC005915.1-201ENST00000624912 2018 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 HCG4-201ENST00000418983 998 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AL592309.1-201ENST00000443127 649 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 HLA-J-203ENST00000494367 1087 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC079140.1-201ENST00000508039 487 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC109322.1-201ENST00000524499 1264 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AL135744.1-201ENST00000565098 629 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 LINC00628-201ENST00000628516 1289 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 TOP3BP1-201ENST00000420768 1380 ntBASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDND2Q8NHS1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC132872.4-202ENST00000622924 2756 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 DUX4L17-201ENST00000557360 1267 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC093520.2-201ENST00000561830 333 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC025678.2-201ENST00000562061 970 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC091167.2-201ENST00000579581 588 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AL009183.1-201ENST00000603760 355 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC009093.7-201ENST00000623853 1223 ntBASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 AC092850.2-201ENST00000623821 2697 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms