Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 POU5F1P6-201ENST00000466990 990 ntBASIC17.66■□□□□ 0.42
BEST2Q8NFU1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 AC125807.1-201ENST00000483097 614 ntBASIC17.66■□□□□ 0.42
BEST2Q8NFU1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 AC005498.2-205ENST00000593218 784 ntBASIC17.66■□□□□ 0.42
BEST2Q8NFU1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 MIR3197-201ENST00000582241 73 ntBASIC17.65■□□□□ 0.42
BEST2Q8NFU1 AC024267.1-201ENST00000582320 895 ntBASIC17.65■□□□□ 0.42
BEST2Q8NFU1 MIR4453-201ENST00000584019 89 ntBASIC17.65■□□□□ 0.42
BEST2Q8NFU1 AL390955.2-201ENST00000603032 514 ntBASIC17.65■□□□□ 0.42
BEST2Q8NFU1 AC003101.2-201ENST00000612557 442 ntBASIC17.65■□□□□ 0.42
BEST2Q8NFU1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST2Q8NFU1 AC011676.5-201ENST00000624864 2660 ntBASIC17.65■□□□□ 0.42
BEST2Q8NFU1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.64■□□□□ 0.42
BEST2Q8NFU1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.64■□□□□ 0.42
BEST2Q8NFU1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BEST2Q8NFU1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BEST2Q8NFU1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST2Q8NFU1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 AL096865.1-201ENST00000606796 927 ntBASIC17.64■□□□□ 0.41
BEST2Q8NFU1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 U82695.1-201ENST00000635752 1889 ntBASIC17.64■□□□□ 0.41
BEST2Q8NFU1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST2Q8NFU1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AC107890.1-201ENST00000422478 521 ntBASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AL353705.2-201ENST00000428243 662 ntBASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms