Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 APP-205ENST00000358918 2366 ntTSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 EDA-201ENST00000338901 1233 ntBASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 AC027612.1-201ENST00000445234 2395 ntBASIC9.04□□□□□ -0.96
SPTSSBQ8NFR3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 UBE2DNL-204ENST00000602536 740 ntBASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms